RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.01□□□□□ -0.17
CDR2-204ENST00000564542 WDR74Q6RFH5 385 aaPredicted RBP14.01□□□□□ -0.17
CDR2-204ENST00000564542 RFLNAQ6ZTI6 216 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 MARK2Q7KZI7 788 aaKnown RBP14.01□□□□□ -0.17
CDR2-204ENST00000564542 TRIM74Q86UV6 250 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 NLRP8Q86W28 1048 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 ZNF761Q86XN6 746 aaPredicted RBP14.01□□□□□ -0.17
CDR2-204ENST00000564542 PTRH1Q86Y79 214 aaKnown RBP14.01□□□□□ -0.17
CDR2-204ENST00000564542 NLGN4XQ8N0W4 816 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 NDUFAF2Q8N183 169 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 NLGN4YQ8NFZ3 816 aaPredicted RBP14.01□□□□□ -0.17
CDR2-204ENST00000564542 ZNF653Q96CK0 615 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 RTP4Q96DX8 246 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 COX14Q96I36 57 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 SLC45A3Q96JT2 553 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 SLC38A3Q99624 504 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 ABCG8Q9H221 673 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 MRPL47Q9HD33 250 aaKnown RBP14.01□□□□□ -0.17
CDR2-204ENST00000564542 LMBRD1Q9NUN5 540 aa14.01□□□□□ -0.17
CDR2-204ENST00000564542 RELNP78509 3460 aa14□□□□□ -0.17
CDR2-204ENST00000564542 A0A0J9YYE9 177 aa14□□□□□ -0.17
CDR2-204ENST00000564542 A0A0U1RQS6 177 aa14□□□□□ -0.17
CDR2-204ENST00000564542 MAP3K6O95382 1288 aa14□□□□□ -0.17
CDR2-204ENST00000564542 TRBC1P01850 177 aa14□□□□□ -0.17
CDR2-204ENST00000564542 PDHA1P08559 390 aa14□□□□□ -0.17
CDR2-204ENST00000564542 MYBL1P10243 752 aa14□□□□□ -0.17
CDR2-204ENST00000564542 TCF4P15884 667 aa14□□□□□ -0.17
CDR2-204ENST00000564542 MAP4P27816 1152 aaKnown RBP14□□□□□ -0.17
CDR2-204ENST00000564542 HHEXQ03014 270 aa14□□□□□ -0.17
CDR2-204ENST00000564542 NCAPHQ15003 741 aa14□□□□□ -0.17
CDR2-204ENST00000564542 ASIC2Q16515 512 aa14□□□□□ -0.17
CDR2-204ENST00000564542 BOLA3Q53S33 107 aa14□□□□□ -0.17
CDR2-204ENST00000564542 SASS6Q6UVJ0 657 aa14□□□□□ -0.17
CDR2-204ENST00000564542 NRSN1Q8IZ57 195 aa14□□□□□ -0.17
CDR2-204ENST00000564542 TEX26Q8N6G2 289 aa14□□□□□ -0.17
CDR2-204ENST00000564542 HSPH1Q92598 858 aa14□□□□□ -0.17
CDR2-204ENST00000564542 SCAMP4Q969E2 229 aa14□□□□□ -0.17
CDR2-204ENST00000564542 KIAA1143Q96AT1 154 aaPredicted RBP14□□□□□ -0.17
CDR2-204ENST00000564542 TRIM11Q96F44 468 aa14□□□□□ -0.17
CDR2-204ENST00000564542 EFHD1Q9BUP0 239 aa14□□□□□ -0.17
CDR2-204ENST00000564542 SPRY4Q9C004 299 aa14□□□□□ -0.17
CDR2-204ENST00000564542 STN1Q9H668 368 aaKnown RBP14□□□□□ -0.17
CDR2-204ENST00000564542 HAUS4Q9H6D7 363 aa14□□□□□ -0.17
CDR2-204ENST00000564542 GPN2Q9H9Y4 310 aaPredicted RBP14□□□□□ -0.17
CDR2-204ENST00000564542 SARS2Q9NP81 518 aaKnown RBP14□□□□□ -0.17
CDR2-204ENST00000564542 ANAPC2Q9UJX6 822 aa14□□□□□ -0.17
CDR2-204ENST00000564542 LRRK2Q5S007 2527 aa14□□□□□ -0.17
CDR2-204ENST00000564542 EML2O95834 649 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 CASRP41180 1078 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 PPM1FP49593 454 aaPredicted RBP13.99□□□□□ -0.17
CDR2-204ENST00000564542 STC1P52823 247 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 MC2RQ01718 297 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 PTSQ03393 145 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 CDC20Q12834 499 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 SKIDA1Q1XH10 827 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 CEACAM20Q6UY09 585 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 CLEC17AQ6ZS10 378 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 ZNF571Q7Z3V5 609 aaPredicted RBP13.99□□□□□ -0.17
CDR2-204ENST00000564542 ARHGAP22Q7Z5H3 698 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 RAVER1Q8IY67 606 aaKnown RBP13.99□□□□□ -0.17
CDR2-204ENST00000564542 EXD1Q8NHP7 514 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 C9orf43Q8TAL5 461 aaPredicted RBP13.99□□□□□ -0.17
CDR2-204ENST00000564542 TEKT4Q8WW24 435 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 AGAP2Q99490 1192 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 ZPBPQ9BS86 351 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 POLR1EQ9GZS1 481 aaKnown RBP13.99□□□□□ -0.17
CDR2-204ENST00000564542 NT5MQ9NPB1 228 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 FBXO8Q9NRD0 319 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 VPS18Q9P253 973 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 MYO1AQ9UBC5 1043 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 DNPEPQ9ULA0 475 aa13.99□□□□□ -0.17
CDR2-204ENST00000564542 DOPEY2Q9Y3R5 2298 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 TRBV23OR9-2A0A075B6M9 112 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 A8MU76 341 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 DDX3XO00571 662 aaKnown RBP eCLIP13.98□□□□□ -0.171e-7■■■□□ 17.5
CDR2-204ENST00000564542 INPP4BO15327 924 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 NKX2-8O15522 239 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 DNAJC6O75061 913 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 RARAP10276 462 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 PRKAR1AP10644 381 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 PRKCIP41743 596 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 EPHA4P54764 986 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 FOXK1P85037 733 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 ABHD18Q0P651 414 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 SNAP47Q5SQN1 464 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 E4F1Q66K89 784 aaPredicted RBP13.98□□□□□ -0.17
CDR2-204ENST00000564542 ALG1LQ6GMV1 187 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 LRRC49Q8IUZ0 686 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 SH3KBP1Q96B97 665 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 SMIM14Q96QK8 99 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 CTRCQ99895 268 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 HERPUD2Q9BSE4 406 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 RIOK2Q9BVS4 552 aaKnown RBP13.98□□□□□ -0.17
CDR2-204ENST00000564542 TRIT1Q9H3H1 467 aaKnown RBP13.98□□□□□ -0.17
CDR2-204ENST00000564542 PCDH18Q9HCL0 1135 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 AIPL1Q9NZN9 384 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 RCOR3Q9P2K3 495 aaPredicted RBP13.98□□□□□ -0.17
CDR2-204ENST00000564542 ANKMY1Q9P2S6 941 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 TBC1D29Q9UFV1 150 aa13.98□□□□□ -0.17
CDR2-204ENST00000564542 TMEM184BQ9Y519 407 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms