RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 DNPEPQ9ULA0 475 aa20.78■□□□□ 0.92
HERC2-204ENST00000563945 PPIL1Q9Y3C6 166 aa20.78■□□□□ 0.92
HERC2-204ENST00000563945 A8MU76 341 aa20.77■□□□□ 0.92
HERC2-204ENST00000563945 RARAP10276 462 aa20.77■□□□□ 0.92
HERC2-204ENST00000563945 CA4P22748 312 aa20.77■□□□□ 0.92
HERC2-204ENST00000563945 IL1R2P27930 398 aa20.77■□□□□ 0.92
HERC2-204ENST00000563945 SSR1P43307 286 aaKnown RBP20.77■□□□□ 0.92
HERC2-204ENST00000563945 KCNAB2Q13303 367 aa20.77■□□□□ 0.92
HERC2-204ENST00000563945 PIGHQ14442 188 aaPredicted RBP20.77■□□□□ 0.92
HERC2-204ENST00000563945 PYCR3Q53H96 274 aa20.77■□□□□ 0.92
HERC2-204ENST00000563945 CCDC122Q5T0U0 273 aa20.77■□□□□ 0.92
HERC2-204ENST00000563945 CLEC17AQ6ZS10 378 aa20.77■□□□□ 0.92
HERC2-204ENST00000563945 ZNF765Q7L2R6 523 aa20.77■□□□□ 0.92
HERC2-204ENST00000563945 NLRP8Q86W28 1048 aa20.77■□□□□ 0.92
HERC2-204ENST00000563945 PTRH1Q86Y79 214 aaKnown RBP20.77■□□□□ 0.92
HERC2-204ENST00000563945 PIH1D2Q8WWB5 315 aa20.77■□□□□ 0.92
HERC2-204ENST00000563945 SCAMP4Q969E2 229 aa20.77■□□□□ 0.92
HERC2-204ENST00000563945 PMEPA1Q969W9 287 aa20.77■□□□□ 0.92
HERC2-204ENST00000563945 SH3KBP1Q96B97 665 aa20.77■□□□□ 0.92
HERC2-204ENST00000563945 GBP4Q96PP9 640 aa20.77■□□□□ 0.92
HERC2-204ENST00000563945 EFHD1Q9BUP0 239 aa20.77■□□□□ 0.92
HERC2-204ENST00000563945 POLR1EQ9GZS1 481 aaKnown RBP20.77■□□□□ 0.92
HERC2-204ENST00000563945 SDK2Q58EX2 2172 aa20.77■□□□□ 0.92
HERC2-204ENST00000563945 GOLGA6L22H0YM25 854 aa20.76■□□□□ 0.91
HERC2-204ENST00000563945 DDX3XO00571 662 aaKnown RBP eCLIP20.76■□□□□ 0.91
HERC2-204ENST00000563945 INPP4BO15327 924 aa20.76■□□□□ 0.91
HERC2-204ENST00000563945 MAP3K6O95382 1288 aa20.76■□□□□ 0.91
HERC2-204ENST00000563945 PDHA1P08559 390 aa20.76■□□□□ 0.91
HERC2-204ENST00000563945 CES1P23141 567 aa20.76■□□□□ 0.91
HERC2-204ENST00000563945 CSF2RBP32927 897 aa20.76■□□□□ 0.91
HERC2-204ENST00000563945 FASLGP48023 281 aa20.76■□□□□ 0.91
HERC2-204ENST00000563945 POLE2P56282 527 aa20.76■□□□□ 0.91
HERC2-204ENST00000563945 TLE1Q04724 770 aa20.76■□□□□ 0.91
HERC2-204ENST00000563945 NCAPHQ15003 741 aa20.76■□□□□ 0.91
HERC2-204ENST00000563945 ANKS6Q68DC2 871 aa20.76■□□□□ 0.91
HERC2-204ENST00000563945 TRIM74Q86UV6 250 aa20.76■□□□□ 0.91
HERC2-204ENST00000563945 ZNF761Q86XN6 746 aaPredicted RBP20.76■□□□□ 0.91
HERC2-204ENST00000563945 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.76■□□□□ 0.91
HERC2-204ENST00000563945 TEKT4Q8WW24 435 aa20.76■□□□□ 0.91
HERC2-204ENST00000563945 NCSTNQ92542 709 aa20.76■□□□□ 0.91
HERC2-204ENST00000563945 GPN2Q9H9Y4 310 aaPredicted RBP20.76■□□□□ 0.91
HERC2-204ENST00000563945 RTN4Q9NQC3 1192 aaKnown RBP20.76■□□□□ 0.91
HERC2-204ENST00000563945 TMEM9Q9P0T7 183 aa20.76■□□□□ 0.91
HERC2-204ENST00000563945 ST14Q9Y5Y6 855 aa20.76■□□□□ 0.91
HERC2-204ENST00000563945 A0A0U1RQS6 177 aa20.75■□□□□ 0.91
HERC2-204ENST00000563945 SLC2A4P14672 509 aa20.75■□□□□ 0.91
HERC2-204ENST00000563945 MAP4P27816 1152 aaKnown RBP20.75■□□□□ 0.91
HERC2-204ENST00000563945 HHEXQ03014 270 aa20.75■□□□□ 0.91
HERC2-204ENST00000563945 PTSQ03393 145 aa20.75■□□□□ 0.91
HERC2-204ENST00000563945 CEACAM20Q6UY09 585 aa20.75■□□□□ 0.91
HERC2-204ENST00000563945 RFLNAQ6ZTI6 216 aa20.75■□□□□ 0.91
HERC2-204ENST00000563945 CHST15Q7LFX5 561 aaPredicted RBP20.75■□□□□ 0.91
HERC2-204ENST00000563945 KDELC2Q7Z4H8 507 aa20.75■□□□□ 0.91
HERC2-204ENST00000563945 NLGN4XQ8N0W4 816 aa20.75■□□□□ 0.91
HERC2-204ENST00000563945 SFRP1Q8N474 314 aa20.75■□□□□ 0.91
HERC2-204ENST00000563945 NLGN4YQ8NFZ3 816 aaPredicted RBP20.75■□□□□ 0.91
HERC2-204ENST00000563945 ZNF564Q8TBZ8 553 aaPredicted RBP20.75■□□□□ 0.91
HERC2-204ENST00000563945 SLC37A2Q8TED4 501 aa20.75■□□□□ 0.91
HERC2-204ENST00000563945 ZPBPQ9BS86 351 aa20.75■□□□□ 0.91
HERC2-204ENST00000563945 RIOK2Q9BVS4 552 aaKnown RBP20.75■□□□□ 0.91
HERC2-204ENST00000563945 PCDH18Q9HCL0 1135 aa20.75■□□□□ 0.91
HERC2-204ENST00000563945 TUBD1Q9UJT1 453 aa20.75■□□□□ 0.91
HERC2-204ENST00000563945 TTLL3Q9Y4R7 772 aa20.75■□□□□ 0.91
HERC2-204ENST00000563945 A0A0J9YYE9 177 aa20.74■□□□□ 0.91
HERC2-204ENST00000563945 SMTNL1A8MU46 457 aa20.74■□□□□ 0.91
HERC2-204ENST00000563945 SOD1P00441 154 aa20.74■□□□□ 0.91
HERC2-204ENST00000563945 TRBC1P01850 177 aa20.74■□□□□ 0.91
HERC2-204ENST00000563945 SKILP12757 684 aa20.74■□□□□ 0.91
HERC2-204ENST00000563945 PRKCIP41743 596 aa20.74■□□□□ 0.91
HERC2-204ENST00000563945 MAPK9P45984 424 aa20.74■□□□□ 0.91
HERC2-204ENST00000563945 ARSDP51689 593 aa20.74■□□□□ 0.91
HERC2-204ENST00000563945 TIGD7Q6NT04 549 aaPredicted RBP20.74■□□□□ 0.91
HERC2-204ENST00000563945 SLC9B2Q86UD5 537 aa20.74■□□□□ 0.91
HERC2-204ENST00000563945 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.74■□□□□ 0.91
HERC2-204ENST00000563945 IP6K2Q9UHH9 426 aa20.74■□□□□ 0.91
HERC2-204ENST00000563945 ZNF165P49910 485 aa20.73■□□□□ 0.91
HERC2-204ENST00000563945 STC1P52823 247 aa20.73■□□□□ 0.91
HERC2-204ENST00000563945 MC2RQ01718 297 aa20.73■□□□□ 0.91
HERC2-204ENST00000563945 MC1RQ01726 317 aa20.73■□□□□ 0.91
HERC2-204ENST00000563945 NFATC2Q13469 925 aa20.73■□□□□ 0.91
HERC2-204ENST00000563945 HADHQ16836 314 aaKnown RBP20.73■□□□□ 0.91
HERC2-204ENST00000563945 WDR74Q6RFH5 385 aaPredicted RBP20.73■□□□□ 0.91
HERC2-204ENST00000563945 TEX26Q8N6G2 289 aa20.73■□□□□ 0.91
HERC2-204ENST00000563945 SLC45A3Q96JT2 553 aa20.73■□□□□ 0.91
HERC2-204ENST00000563945 CTRCQ99895 268 aa20.73■□□□□ 0.91
HERC2-204ENST00000563945 ISCUQ9H1K1 167 aa20.73■□□□□ 0.91
HERC2-204ENST00000563945 HSD3B7Q9H2F3 369 aa20.73■□□□□ 0.91
HERC2-204ENST00000563945 TRIT1Q9H3H1 467 aaKnown RBP20.73■□□□□ 0.91
HERC2-204ENST00000563945 RBM22Q9NW64 420 aaKnown RBP eCLIP20.73■□□□□ 0.91
HERC2-204ENST00000563945 VPS18Q9P253 973 aa20.73■□□□□ 0.91
HERC2-204ENST00000563945 PDP2Q9P2J9 529 aa20.73■□□□□ 0.91
HERC2-204ENST00000563945 RCOR3Q9P2K3 495 aaPredicted RBP20.73■□□□□ 0.91
HERC2-204ENST00000563945 PILRAQ9UKJ1 303 aa20.73■□□□□ 0.91
HERC2-204ENST00000563945 CHKBQ9Y259 395 aa20.73■□□□□ 0.91
HERC2-204ENST00000563945 CYSRT1A8MQ03 144 aa20.72■□□□□ 0.91
HERC2-204ENST00000563945 FZD6O60353 706 aa20.72■□□□□ 0.91
HERC2-204ENST00000563945 SNX2O60749 519 aa20.72■□□□□ 0.91
HERC2-204ENST00000563945 ATP1A1P05023 1023 aaKnown RBP20.72■□□□□ 0.91
HERC2-204ENST00000563945 PRKAR1AP10644 381 aa20.72■□□□□ 0.91
HERC2-204ENST00000563945 TCF4P15884 667 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms