RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 BBS12Q6ZW61 710 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 FSTL5Q8N475 847 aaPredicted RBP13.38□□□□□ -0.27
SPG7-207ENST00000563218 TTC13Q8NBP0 860 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 GPR156Q8NFN8 814 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 CCL4L1Q8NHW4 92 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 WDR48Q8TAF3 677 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 FAM71BQ8TC56 605 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 C1orf54Q8WWF1 131 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 EXTL1Q92935 676 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 NSMCE3Q96MG7 304 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 RNF157Q96PX1 679 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 KCTD15Q96SI1 283 aaPredicted RBP13.38□□□□□ -0.27
SPG7-207ENST00000563218 C1QTNF7Q9BXJ2 289 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 LRRN3Q9H3W5 708 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 LRRC19Q9H756 370 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 FGF22Q9HCT0 170 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 FOXJ2Q9P0K8 574 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 KLQ9UEF7 1012 aa13.38□□□□□ -0.27
SPG7-207ENST00000563218 UBR5O95071 2799 aaPredicted RBP13.38□□□□□ -0.27
SPG7-207ENST00000563218 TMEM202A6NGA9 273 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 ZSCAN5CA6NGD5 496 aaPredicted RBP13.37□□□□□ -0.27
SPG7-207ENST00000563218 H3BRJ5 948 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 RAD51CO43502 376 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 TUBBP07437 444 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 ALPIP09923 528 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 MCM3P25205 808 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 COILP38432 576 aaPredicted RBP13.37□□□□□ -0.27
SPG7-207ENST00000563218 DYNLT1P63172 113 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 RAD51Q06609 339 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 RALGDSQ12967 914 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 DHX34Q14147 1143 aaKnown RBP13.37□□□□□ -0.27
SPG7-207ENST00000563218 CCNG2Q16589 344 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 UGP2Q16851 508 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 INO80DQ53TQ3 878 aaPredicted RBP13.37□□□□□ -0.27
SPG7-207ENST00000563218 ANKRD20A8PQ5CZ79 823 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 CCDC137Q6PK04 289 aaKnown RBP13.37□□□□□ -0.27
SPG7-207ENST00000563218 GKN2Q86XP6 184 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 CAMK1DQ8IU85 385 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 CCNJLQ8IV13 435 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 CELF6Q96J87 481 aaKnown RBP13.37□□□□□ -0.27
SPG7-207ENST00000563218 WDR92Q96MX6 357 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 RBM15Q96T37 977 aaKnown RBP eCLIP13.37□□□□□ -0.27
SPG7-207ENST00000563218 FRMD8P1Q9BZ68 369 aaPredicted RBP13.37□□□□□ -0.27
SPG7-207ENST00000563218 SUV39H2Q9H5I1 410 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 ANKZF1Q9H8Y5 726 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 RCOR3Q9P2K3 495 aaPredicted RBP13.37□□□□□ -0.27
SPG7-207ENST00000563218 AMACRQ9UHK6 382 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 LOXL2Q9Y4K0 774 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 PCDHGA7Q9Y5G6 932 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 RNF215Q9Y6U7 377 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 UNC79Q9P2D8 2635 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 RELNP78509 3460 aa13.37□□□□□ -0.27
SPG7-207ENST00000563218 TLN1Q9Y490 2541 aaKnown RBP13.37□□□□□ -0.27
SPG7-207ENST00000563218 PTPN13Q12923 2485 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 PRAMEF33A0A0G2JMD5 474 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 FAM187AA6NFU0 413 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 B4DGG1 531 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 TOR1BO14657 336 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 APOL1O14791 398 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 PRAMEF10O60809 474 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 HEXIM1O94992 359 aaKnown RBP13.36□□□□□ -0.27
SPG7-207ENST00000563218 ZFXP17010 805 aaPredicted RBP13.36□□□□□ -0.27
SPG7-207ENST00000563218 XPAP23025 273 aaPredicted RBP13.36□□□□□ -0.27
SPG7-207ENST00000563218 CCKBRP32239 447 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 MLLT3P42568 568 aaPredicted RBP13.36□□□□□ -0.27
SPG7-207ENST00000563218 BLKP51451 505 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 ZNF135P52742 658 aaPredicted RBP13.36□□□□□ -0.27
SPG7-207ENST00000563218 CYP4F2P78329 520 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 DR1Q01658 176 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 KCNC4Q03721 635 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 ADCY2Q08462 1091 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 ELP6Q0PNE2 266 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 SNX1Q13596 522 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 ARHGAP36Q6ZRI8 547 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 ZFAND4Q86XD8 727 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 GRK7Q8WTQ7 553 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 CASKIN2Q8WXE0 1202 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 ATG4AQ8WYN0 398 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 FAF2Q96CS3 445 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 CSPG4P5Q96PW8 444 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 LGR4Q9BXB1 951 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 PARD6BQ9BYG5 372 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 RETREG1Q9H6L5 497 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 UBA2Q9UBT2 640 aaPredicted RBP13.36□□□□□ -0.27
SPG7-207ENST00000563218 PCYOX1Q9UHG3 505 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 FEZ2Q9UHY8 353 aaPredicted RBP13.36□□□□□ -0.27
SPG7-207ENST00000563218 R3HDM2Q9Y2K5 976 aaKnown RBP13.36□□□□□ -0.27
SPG7-207ENST00000563218 DOPEY2Q9Y3R5 2298 aa13.36□□□□□ -0.27
SPG7-207ENST00000563218 WASH4PA8MWX3 477 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 A8MX80 341 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 C9orf172C9J069 976 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 APOC4-APOC2K7ER74 178 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 EEF2KO00418 725 aaKnown RBP13.35□□□□□ -0.27
SPG7-207ENST00000563218 TTI1O43156 1089 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 DAPK3O43293 454 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 WISP1O95388 367 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 TNFP01375 233 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 APOC2P02655 101 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 JMJD7P0C870 316 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 IL4RP24394 825 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms