RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 LRRC39Q96DD0 335 aa12.69□□□□□ -0.38
CDH11-204ENST00000562712 KLHDC7BQ96G42 594 aa12.69□□□□□ -0.38
CDH11-204ENST00000562712 CDKN2AIPNLQ96HQ2 116 aa12.69□□□□□ -0.38
CDH11-204ENST00000562712 SIGLEC10Q96LC7 697 aa12.69□□□□□ -0.38
CDH11-204ENST00000562712 APOOQ9BUR5 198 aa12.69□□□□□ -0.38
CDH11-204ENST00000562712 TEX101Q9BY14 249 aa12.69□□□□□ -0.38
CDH11-204ENST00000562712 FAM129AQ9BZQ8 928 aa12.69□□□□□ -0.38
CDH11-204ENST00000562712 EPB41L5Q9HCM4 733 aa12.69□□□□□ -0.38
CDH11-204ENST00000562712 FAM114A2Q9NRY5 505 aa12.69□□□□□ -0.38
CDH11-204ENST00000562712 SYBUQ9NX95 663 aa12.69□□□□□ -0.38
CDH11-204ENST00000562712 GMEB2Q9UKD1 530 aa12.69□□□□□ -0.38
CDH11-204ENST00000562712 SOX13Q9UN79 622 aa12.69□□□□□ -0.38
CDH11-204ENST00000562712 DOCK9Q9BZ29 2069 aa12.69□□□□□ -0.38
CDH11-204ENST00000562712 NCOR2Q9Y618 2525 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 PLXNA2O75051 1894 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 GLYATL1P3A0A0U1RQE8 302 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 FAM237BA0A1B0GVD1 139 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 H0Y8X5 98 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 LRP3O75074 770 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 SLU7O95391 586 aaKnown RBP12.68□□□□□ -0.38
CDH11-204ENST00000562712 SOD1P00441 154 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 WNT1P04628 370 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 PCCBP05166 539 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 GPR1P46091 355 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 CSNK1EP49674 416 aaKnown RBP12.68□□□□□ -0.38
CDH11-204ENST00000562712 PLTPP55058 493 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 ARL4CP56559 192 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 ACVR1Q04771 509 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 HIF1AQ16665 826 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 RAET1GQ6H3X3 334 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 PELI3Q8N2H9 469 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 MPP5Q8N3R9 675 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 OR13C4Q8NGS5 318 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 OR13J1Q8NGT2 312 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 SGSM3Q96HU1 749 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 HIC2Q96JB3 615 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 DNAJC1Q96KC8 554 aaKnown RBP12.68□□□□□ -0.38
CDH11-204ENST00000562712 ZNF778Q96MU6 729 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 MYOCQ99972 504 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 NAT9Q9BTE0 207 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 SPATA16Q9BXB7 569 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 FOXP3Q9BZS1 431 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 GPR27Q9NS67 375 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 SAMD15Q9P1V8 674 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 CNOT6Q9ULM6 557 aaKnown RBP12.68□□□□□ -0.38
CDH11-204ENST00000562712 SLC6A14Q9UN76 642 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 CA5BQ9Y2D0 317 aa12.68□□□□□ -0.38
CDH11-204ENST00000562712 ATXN2Q99700 1313 aaKnown RBP12.67□□□□□ -0.38
CDH11-204ENST00000562712 ESYT3A0FGR9 886 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 AGAP14A8MT82 685 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 GAPDHSO14556 408 aaPredicted RBP12.67□□□□□ -0.38
CDH11-204ENST00000562712 KHNYNO15037 678 aaKnown RBP12.67□□□□□ -0.38
CDH11-204ENST00000562712 SRP72O76094 671 aaKnown RBP12.67□□□□□ -0.38
CDH11-204ENST00000562712 ZNF806P0C7X5 589 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 THEGLP0DJG4 465 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 ID4P47928 161 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 C21orf59P57076 290 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 XIAPP98170 497 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 DHX9Q08211 1270 aaKnown RBP12.67□□□□□ -0.38
CDH11-204ENST00000562712 PEX6Q13608 980 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 ITGA9Q13797 1035 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 PTK2BQ14289 1009 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 MSS51Q4VC12 460 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 TRIM61Q5EBN2 209 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 ALS2CLQ60I27 953 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 CASC4Q6P4E1 433 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 TMEM135Q86UB9 458 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 CCNJLQ8IV13 435 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 IFT20Q8IY31 132 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 AGGF1Q8N302 714 aaeCLIP12.67□□□□□ -0.38
CDH11-204ENST00000562712 LRRN4CLQ8ND94 238 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 OR13H1Q8NG92 308 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 FBXO25Q8TCJ0 367 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 ZNF398Q8TD17 642 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 BTN2A2Q8WVV5 523 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 FUBP1Q96AE4 644 aaKnown RBP12.67□□□□□ -0.38
CDH11-204ENST00000562712 VPS35Q96QK1 796 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 AGAP2Q99490 1192 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 EBNA1BP2Q99848 306 aaKnown RBP12.67□□□□□ -0.38
CDH11-204ENST00000562712 ZDHHC5Q9C0B5 715 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 PHACTR1Q9C0D0 580 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 WDR26Q9H7D7 661 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 ERVMER34-1Q9H9K5 563 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 CAPN10Q9HC96 672 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 GDF3Q9NR23 364 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 PHPT1Q9NRX4 125 aaPredicted RBP12.67□□□□□ -0.38
CDH11-204ENST00000562712 TREX1Q9NSU2 369 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 ZDHHC18Q9NUE0 388 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 ANKRD6Q9Y2G4 727 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 OR1A2Q9Y585 309 aa12.67□□□□□ -0.38
CDH11-204ENST00000562712 SPTY2D1-AS1A0A0U1RR47 76 aa12.66□□□□□ -0.38
CDH11-204ENST00000562712 FADS2P1A8MWK0 482 aa12.66□□□□□ -0.38
CDH11-204ENST00000562712 E7ESA3 106 aa12.66□□□□□ -0.38
CDH11-204ENST00000562712 CACNB4O00305 520 aaPredicted RBP12.66□□□□□ -0.38
CDH11-204ENST00000562712 EIF3HO15372 352 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDH11-204ENST00000562712 USP1O94782 785 aa12.66□□□□□ -0.38
CDH11-204ENST00000562712 PRAMEF1O95521 474 aa12.66□□□□□ -0.38
CDH11-204ENST00000562712 TTC4O95801 387 aa12.66□□□□□ -0.38
CDH11-204ENST00000562712 CFIP05156 583 aa12.66□□□□□ -0.38
CDH11-204ENST00000562712 POLBP06746 335 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms