RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 NLGN4YQ8NFZ3 816 aaPredicted RBP16.48■□□□□ 0.23
CMTM3-205ENST00000562707 EXD1Q8NHP7 514 aa16.48■□□□□ 0.23
CMTM3-205ENST00000562707 SCAMP4Q969E2 229 aa16.48■□□□□ 0.23
CMTM3-205ENST00000562707 SH3KBP1Q96B97 665 aa16.48■□□□□ 0.23
CMTM3-205ENST00000562707 TRIM11Q96F44 468 aa16.48■□□□□ 0.23
CMTM3-205ENST00000562707 CSPG4P5Q96PW8 444 aa16.48■□□□□ 0.23
CMTM3-205ENST00000562707 ZPBPQ9BS86 351 aa16.48■□□□□ 0.23
CMTM3-205ENST00000562707 STN1Q9H668 368 aaKnown RBP16.48■□□□□ 0.23
CMTM3-205ENST00000562707 HAUS4Q9H6D7 363 aa16.48■□□□□ 0.23
CMTM3-205ENST00000562707 NT5MQ9NPB1 228 aa16.48■□□□□ 0.23
CMTM3-205ENST00000562707 LMBRD1Q9NUN5 540 aa16.48■□□□□ 0.23
CMTM3-205ENST00000562707 PDP2Q9P2J9 529 aa16.48■□□□□ 0.23
CMTM3-205ENST00000562707 MYO1AQ9UBC5 1043 aa16.48■□□□□ 0.23
CMTM3-205ENST00000562707 ZNHIT2Q9UHR6 403 aa16.48■□□□□ 0.23
CMTM3-205ENST00000562707 PILRAQ9UKJ1 303 aa16.48■□□□□ 0.23
CMTM3-205ENST00000562707 SPTA1P02549 2419 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 LRRK1Q38SD2 2015 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 LRRC53A6NM62 1247 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 NKX2-8O15522 239 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 MAP3K6O95382 1288 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 SOD1P00441 154 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 PDHA1P08559 390 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 MYBL1P10243 752 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 ZNF30P17039 623 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 IL1R2P27930 398 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 MC2RQ01718 297 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 HHEXQ03014 270 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 PTSQ03393 145 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 SKIDA1Q1XH10 827 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 WDR74Q6RFH5 385 aaPredicted RBP16.47■□□□□ 0.23
CMTM3-205ENST00000562707 CEACAM20Q6UY09 585 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 TRIM74Q86UV6 250 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 LRRC49Q8IUZ0 686 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 SFRP1Q8N474 314 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 NCSTNQ92542 709 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.47■□□□□ 0.23
CMTM3-205ENST00000562707 ANAPC2Q9UJX6 822 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 DNPEPQ9ULA0 475 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 BOD1L1Q8NFC6 3051 aa16.47■□□□□ 0.23
CMTM3-205ENST00000562707 SCN8AQ9UQD0 1980 aa16.46■□□□□ 0.23
CMTM3-205ENST00000562707 A0A0U1RQS6 177 aa16.46■□□□□ 0.23
CMTM3-205ENST00000562707 INPP4BO15327 924 aa16.46■□□□□ 0.23
CMTM3-205ENST00000562707 RARAP10276 462 aa16.46■□□□□ 0.23
CMTM3-205ENST00000562707 PRKAR1AP10644 381 aa16.46■□□□□ 0.23
CMTM3-205ENST00000562707 NFATC2Q13469 925 aa16.46■□□□□ 0.23
CMTM3-205ENST00000562707 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.46■□□□□ 0.23
CMTM3-205ENST00000562707 ZNF571Q7Z3V5 609 aaPredicted RBP16.46■□□□□ 0.23
CMTM3-205ENST00000562707 KDELC2Q7Z4H8 507 aa16.46■□□□□ 0.23
CMTM3-205ENST00000562707 ARHGAP22Q7Z5H3 698 aa16.46■□□□□ 0.23
CMTM3-205ENST00000562707 BMPERQ8N8U9 685 aa16.46■□□□□ 0.23
CMTM3-205ENST00000562707 C9orf43Q8TAL5 461 aaPredicted RBP16.46■□□□□ 0.23
CMTM3-205ENST00000562707 RTP4Q96DX8 246 aa16.46■□□□□ 0.23
CMTM3-205ENST00000562707 CTRCQ99895 268 aa16.46■□□□□ 0.23
CMTM3-205ENST00000562707 RIOK2Q9BVS4 552 aaKnown RBP16.46■□□□□ 0.23
CMTM3-205ENST00000562707 POLR1EQ9GZS1 481 aaKnown RBP16.46■□□□□ 0.23
CMTM3-205ENST00000562707 EPN3Q9H201 632 aa16.46■□□□□ 0.23
CMTM3-205ENST00000562707 TRIT1Q9H3H1 467 aaKnown RBP16.46■□□□□ 0.23
CMTM3-205ENST00000562707 SARS2Q9NP81 518 aaKnown RBP16.46■□□□□ 0.23
CMTM3-205ENST00000562707 FBXO8Q9NRD0 319 aa16.46■□□□□ 0.23
CMTM3-205ENST00000562707 ANKRD36A6QL64 1941 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 A0A0J9YYE9 177 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 DDX3XO00571 662 aaKnown RBP eCLIP16.45■□□□□ 0.222e-10■■■□□ 18.2
CMTM3-205ENST00000562707 FZD6O60353 706 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 TRBC1P01850 177 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 SLC2A4P14672 509 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 CES1P23141 567 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 CASRP41180 1078 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 MAPK9P45984 424 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 STC1P52823 247 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 MC1RQ01726 317 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 KLHL30Q0D2K2 578 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 ABHD18Q0P651 414 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 UBAP2LQ14157 1087 aaKnown RBP16.45■□□□□ 0.22
CMTM3-205ENST00000562707 PIGHQ14442 188 aaPredicted RBP16.45■□□□□ 0.22
CMTM3-205ENST00000562707 NCAPHQ15003 741 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 CHST15Q7LFX5 561 aaPredicted RBP16.45■□□□□ 0.22
CMTM3-205ENST00000562707 SLC9B2Q86UD5 537 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 TEX26Q8N6G2 289 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 TEKT4Q8WW24 435 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 COX14Q96I36 57 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 AGAP2Q99490 1192 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.45■□□□□ 0.22
CMTM3-205ENST00000562707 SPRY4Q9C004 299 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 PCDH18Q9HCL0 1135 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 ZNF71Q9NQZ8 489 aaPredicted RBP16.45■□□□□ 0.22
CMTM3-205ENST00000562707 HAUS2Q9NVX0 235 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 AIPL1Q9NZN9 384 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 VPS18Q9P253 973 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 PRKAB1Q9Y478 270 aa16.45■□□□□ 0.22
CMTM3-205ENST00000562707 LOC101059948A0A1B0GTJ6 334 aa16.44■□□□□ 0.22
CMTM3-205ENST00000562707 EML2O95834 649 aa16.44■□□□□ 0.22
CMTM3-205ENST00000562707 TCF4P15884 667 aa16.44■□□□□ 0.22
CMTM3-205ENST00000562707 CA4P22748 312 aa16.44■□□□□ 0.22
CMTM3-205ENST00000562707 PRKCIP41743 596 aa16.44■□□□□ 0.22
CMTM3-205ENST00000562707 EPHA4P54764 986 aa16.44■□□□□ 0.22
CMTM3-205ENST00000562707 CDC20Q12834 499 aa16.44■□□□□ 0.22
CMTM3-205ENST00000562707 KRT81Q14533 505 aa16.44■□□□□ 0.22
CMTM3-205ENST00000562707 IYDQ6PHW0 289 aa16.44■□□□□ 0.22
CMTM3-205ENST00000562707 RAVER1Q8IY67 606 aaKnown RBP16.44■□□□□ 0.22
CMTM3-205ENST00000562707 UNC5BQ8IZJ1 945 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms