RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 PEX6Q13608 980 aa16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 DPYSL3Q14195 570 aa16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 TBR1Q16650 682 aa16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 XKR5Q6UX68 686 aa16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ZNF765Q7L2R6 523 aa16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 NLRP8Q86W28 1048 aa16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 CPNE8Q86YQ8 564 aa16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 LRRC49Q8IUZ0 686 aa16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 TAAR9Q96RI9 348 aa16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 TDRD1Q9BXT4 1180 aaKnown RBP16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 KCNK4Q9NYG8 393 aa16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 PCDHGA3Q9Y5H0 932 aa16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 A0A087X0T9 212 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 A0A1W2PQJ5 194 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 MATN3O15232 486 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 INPP4BO15327 924 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 PRLP01236 227 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 FAM228BP0C875 321 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 PBX1P40424 430 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 FASLGP48023 281 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 NFKB2Q00653 900 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 TRA2AQ13595 282 aaKnown RBP eCLIP16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 PAFAH1B3Q15102 231 aaKnown RBP16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ATP13A4Q4VNC1 1196 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ZNF761Q86XN6 746 aaPredicted RBP16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 GALNT13Q8IUC8 556 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 NDUFAF2Q8N183 169 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ZSCAN1Q8NBB4 408 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 AGBL5Q8NDL9 886 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ARRDC2Q8TBH0 407 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 SLC37A2Q8TED4 501 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 LRRN4Q8WUT4 740 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 SYN2Q92777 582 aaPredicted RBP16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 NKD1Q969G9 470 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 FUCA2Q9BTY2 467 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 RIOK2Q9BVS4 552 aaKnown RBP16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 CLMPQ9H6B4 373 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 OCIAD1Q9NX40 245 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 CHKBQ9Y259 395 aa16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 BZW2Q9Y6E2 419 aaKnown RBP16.59■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 TRBV23OR9-2A0A075B6M9 112 aa16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 DNAJC6O75061 913 aa16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 WISP1O95388 367 aa16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CLDN7O95471 211 aa16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 SSR1P43307 286 aaKnown RBP16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 EPHB1P54762 984 aa16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 NIPAL4Q0D2K0 466 aa16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 LRP8Q14114 963 aa16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ANKRD20A8PQ5CZ79 823 aa16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 TIGD7Q6NT04 549 aaPredicted RBP16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 SFRP1Q8N474 314 aa16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 EXD1Q8NHP7 514 aa16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ART4Q93070 314 aa16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 WDR24Q96S15 920 aa16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 DDA1Q9BW61 102 aa16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 FAM117AQ9C073 453 aa16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 RBM22Q9NW64 420 aaKnown RBP eCLIP16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CNOT6Q9ULM6 557 aaKnown RBP16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 PRKAB1Q9Y478 270 aa16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 TTLL3Q9Y4R7 772 aa16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 B3GALT1Q9Y5Z6 326 aa16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 OAS3Q9Y6K5 1087 aaKnown RBP16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ZFC3H1O60293 1989 aaKnown RBP16.58■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 MYO1FO00160 1098 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ATP1A1P05023 1023 aaKnown RBP16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 SERPING1P05155 500 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 HLA-DQB2P05538 268 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 PYGLP06737 847 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CCNCP24863 283 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CSTF2P33240 577 aaKnown RBP eCLIP16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 UGT1A3P35503 534 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 GJC1P36383 396 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 GPLD1P80108 840 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 KCNC4Q03721 635 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CLCA4Q14CN2 919 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CCDC122Q5T0U0 273 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CAVIN1Q6NZI2 390 aaKnown RBP16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 TMEM71Q6P5X7 295 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 NRSN1Q8IZ57 195 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 BMPERQ8N8U9 685 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 FATE1Q969F0 183 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 TSGA13Q96PP4 275 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 LYSMD1Q96S90 227 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 DPYSL5Q9BPU6 564 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 SLC12A9Q9BXP2 914 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 TRIM4Q9C037 500 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 PDP2Q9P2J9 529 aa16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 HEMK1Q9Y5R4 338 aaPredicted RBP16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 SPENQ96T58 3664 aaKnown RBP16.57■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 FADS2P1A8MWK0 482 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 TERTO14746 1132 aaKnown RBP16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ASMTLO95671 621 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 LIFP15018 202 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CES1P23141 567 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ATP1A2P50993 1020 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 TAS2R40P59535 323 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 GBE1Q04446 702 aa16.56■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 IFI16Q16666 785 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms