RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 MBNL1Q9NR56 388 aaKnown RBP10.66□□□□□ -0.7
TPM1-229ENST00000561242 MTRF1LQ9UGC7 380 aaKnown RBP10.66□□□□□ -0.7
TPM1-229ENST00000561242 CA5BQ9Y2D0 317 aa10.66□□□□□ -0.7
TPM1-229ENST00000561242 SPTY2D1-AS1A0A0U1RR47 76 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 A0A1B0GTQ1 180 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 LNP1A1A4G5 178 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 GPR89AB7ZAQ6 455 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 H0Y8X5 98 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 GOLGA8MH3BSY2 632 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 QSOX1O00391 747 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 RAD51BO15315 384 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 BUD23O43709 281 aaKnown RBP10.65□□□□□ -0.7
TPM1-229ENST00000561242 VEGFDO43915 354 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 SUN1O94901 812 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 POLBP06746 335 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 C1SP09871 688 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 GPR89BP0CG08 455 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 ZNF883P0CG24 379 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 MLNP12872 115 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 LHCGRP22888 699 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 IGFALSP35858 605 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 CTSKP43235 329 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 GNPDA1P46926 289 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 DCDC1P59894 354 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 PFN3P60673 137 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 CDK3Q00526 305 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 C2orf54Q08AI8 447 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 PTK6Q13882 451 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 MORF4L2Q15014 288 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 SIX1Q15475 284 aaPredicted RBP10.65□□□□□ -0.7
TPM1-229ENST00000561242 GPR33Q49SQ1 333 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 PRRT3Q5FWE3 981 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 ARMC3Q5W041 872 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 MRNIPQ6NTE8 343 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 GCNT7Q6ZNI0 430 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 NYAP1Q6ZVC0 841 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 CENPUQ71F23 418 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 MARK2Q7KZI7 788 aaKnown RBP10.65□□□□□ -0.7
TPM1-229ENST00000561242 TECPR1Q7Z6L1 1165 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 JAMLQ86YT9 394 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 PHACTR4Q8IZ21 702 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 TMEM145Q8NBT3 493 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 CALML6Q8TD86 181 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 SCAMP4Q969E2 229 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 GLYATL1Q969I3 302 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 ZNF514Q96K75 400 aaPredicted RBP10.65□□□□□ -0.7
TPM1-229ENST00000561242 BMFQ96LC9 184 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 COPS8Q99627 209 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 ABCG4Q9H172 646 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 TRIM39Q9HCM9 518 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 FTSJ1Q9UET6 329 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 VPS9D1Q9Y2B5 631 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 PCDHGB2Q9Y5G2 931 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 ARL5AQ9Y689 179 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 EYSQ5T1H1 3165 aa10.65□□□□□ -0.7
TPM1-229ENST00000561242 KIAA1549LQ6ZVL6 1849 aa10.65□□□□□ -0.71
TPM1-229ENST00000561242 NCOR1O75376 2440 aa10.65□□□□□ -0.71
TPM1-229ENST00000561242 A0A1W2PR77 199 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 DNALI1O14645 258 aaPredicted RBP10.64□□□□□ -0.71
TPM1-229ENST00000561242 TTI1O43156 1089 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 AQP9O43315 295 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 KCNJ13O60928 360 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 NDUFS3O75489 264 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 SRP72O76094 671 aaKnown RBP10.64□□□□□ -0.71
TPM1-229ENST00000561242 PRAMEF1O95521 474 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 LDOC1O95751 146 aaPredicted RBP10.64□□□□□ -0.71
TPM1-229ENST00000561242 CSF2P04141 144 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 ATXN1LP0C7T5 689 aaKnown RBP10.64□□□□□ -0.71
TPM1-229ENST00000561242 BPIP17213 487 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 MC4RP32245 332 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 ADRA1AP35348 466 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 HALP42357 657 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 RXRGP48443 463 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 HK3P52790 923 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 LIMK1P53667 647 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 IL9RQ01113 521 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 CACNG1Q06432 222 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 FGL2Q14314 439 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 PUM1Q14671 1186 aaKnown RBP eCLIP10.64□□□□□ -0.71
TPM1-229ENST00000561242 INSCQ1MX18 579 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 RSPO4Q2I0M5 234 aaPredicted RBP10.64□□□□□ -0.71
TPM1-229ENST00000561242 ZNF423Q2M1K9 1284 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 BBS9Q3SYG4 887 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 GLE1Q53GS7 698 aaKnown RBP10.64□□□□□ -0.71
TPM1-229ENST00000561242 CCDC157Q569K6 752 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 ZNF542PQ5EBM4 170 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 PRAMEF14Q5SWL7 426 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 AFTPHQ6ULP2 937 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 LAYNQ6UX15 382 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 CERS6Q6ZMG9 384 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 SNX20Q7Z614 316 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 PRUNE1Q86TP1 453 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 TRAPPC5Q8IUR0 188 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 PALM2Q8IXS6 379 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 BEND7Q8N7W2 519 aaPredicted RBP10.64□□□□□ -0.71
TPM1-229ENST00000561242 AVL9Q8NBF6 648 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 MCUQ8NE86 351 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 PEX13Q92968 403 aa10.64□□□□□ -0.71
TPM1-229ENST00000561242 TSACCQ96A04 125 aaPredicted RBP10.64□□□□□ -0.71
TPM1-229ENST00000561242 OR2M4Q96R27 311 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms