RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 MARCKSL1P49006 195 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 MAZP56270 477 aaKnown RBP16.1■□□□□ 0.17
SPG21-211ENST00000560564 DYNLT1P63172 113 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 CCDC173Q0VFZ6 552 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 ILF3Q12906 894 aaKnown RBP eCLIP16.1■□□□□ 0.17
SPG21-211ENST00000560564 GALNT3Q14435 633 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 SLC14A2Q15849 920 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 PYCR3Q53H96 274 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 DOK6Q6PKX4 331 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 B4GALNT4Q76KP1 1039 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 TMPRSS9Q7Z410 1059 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 RFX6Q8HWS3 928 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 NAGSQ8N159 534 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 KIAA1524Q8TCG1 905 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 PATE1Q8WXA2 126 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 MLPHQ9BV36 600 aaPredicted RBP16.1■□□□□ 0.17
SPG21-211ENST00000560564 MAK16Q9BXY0 300 aaKnown RBP16.1■□□□□ 0.17
SPG21-211ENST00000560564 BRD8Q9H0E9 1235 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 SUDS3Q9H7L9 328 aaPredicted RBP16.1■□□□□ 0.17
SPG21-211ENST00000560564 SYNDIG1Q9H7V2 258 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 THSD1Q9NS62 852 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 LRIT1Q9P2V4 623 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 SAE1Q9UBE0 346 aaPredicted RBP16.1■□□□□ 0.17
SPG21-211ENST00000560564 SSUH2Q9Y2M2 353 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 TMEM98Q9Y2Y6 226 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 PLEKHM1Q9Y4G2 1056 aa16.1■□□□□ 0.17
SPG21-211ENST00000560564 OAS3Q9Y6K5 1087 aaKnown RBP16.1■□□□□ 0.17
SPG21-211ENST00000560564 HELZ2Q9BYK8 2649 aaKnown RBP16.09■□□□□ 0.17
SPG21-211ENST00000560564 A0A0A6YYK5 440 aaPredicted RBP16.09■□□□□ 0.17
SPG21-211ENST00000560564 FADS2P1A8MWK0 482 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 B4GAT1O43505 415 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 TNNT1P13805 278 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 MLLT3P42568 568 aaPredicted RBP16.09■□□□□ 0.17
SPG21-211ENST00000560564 NR2C2P49116 596 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 B4GALNT1Q00973 533 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 ZFP36L1Q07352 338 aaKnown RBP16.09■□□□□ 0.17
SPG21-211ENST00000560564 TEX44Q53QW1 395 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 SLC30A9Q6PML9 568 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 SPOCD1Q6ZMY3 1216 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 LYSMD3Q7Z3D4 306 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 CLEC14AQ86T13 490 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 NT5DC3Q86UY8 548 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 SLITRK4Q8IW52 837 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 CCDC170Q8IYT3 715 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 KATNAL2Q8IYT4 538 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 Q8N9G6 341 aaPredicted RBP16.09■□□□□ 0.17
SPG21-211ENST00000560564 EXD1Q8NHP7 514 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 ZDHHC1Q8WTX9 485 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 TEKT5Q96M29 485 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 AGAP3Q96P47 875 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 OR2M4Q96R27 311 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 FOXP3Q9BZS1 431 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 VPS18Q9P253 973 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 PCDHA13Q9Y5I0 950 aa16.09■□□□□ 0.17
SPG21-211ENST00000560564 COL6A6A6NMZ7 2263 aa16.08■□□□□ 0.17
SPG21-211ENST00000560564 PIEZO2Q9H5I5 2752 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 hCG_1818297A0A087WSY0 165 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 RGSL1A5PLK6 1076 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 RCCD1A6NED2 376 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 CST8O60676 142 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 DNAJC6O75061 913 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 ECEL1O95672 775 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 PTPN3P26045 913 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 CD68P34810 354 aaPredicted RBP16.08■□□□□ 0.16
SPG21-211ENST00000560564 ZNF75DP51815 510 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 INHBCP55103 352 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 WASHC5Q12768 1159 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 EIF3IQ13347 325 aaKnown RBP16.08■□□□□ 0.16
SPG21-211ENST00000560564 TFDP2Q14188 446 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 LLGL1Q15334 1064 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 C11orf63Q6NUN7 778 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 ARL14Q8N4G2 192 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 SPATA22Q8NHS9 363 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 MRFAP1L1Q96HT8 127 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 ADGRE3Q9BY15 652 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 CDH19Q9H159 772 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 RBSNQ9H1K0 784 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 GLOD4Q9HC38 313 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 SEPT10Q9P0V9 454 aa16.08■□□□□ 0.16
SPG21-211ENST00000560564 NFKBIL1Q9UBC1 381 aaPredicted RBP16.08■□□□□ 0.16
SPG21-211ENST00000560564 ATXN7L1Q9ULK2 861 aaPredicted RBP16.08■□□□□ 0.16
SPG21-211ENST00000560564 PLD2O14939 933 aa16.07■□□□□ 0.16
SPG21-211ENST00000560564 INPP4BO15327 924 aa16.07■□□□□ 0.16
SPG21-211ENST00000560564 MT-CYBP00156 380 aaPredicted RBP16.07■□□□□ 0.16
SPG21-211ENST00000560564 ITGA2BP08514 1039 aa16.07■□□□□ 0.16
SPG21-211ENST00000560564 RBMS1P29558 406 aaKnown RBP16.07■□□□□ 0.16
SPG21-211ENST00000560564 ACTR1BP42025 376 aa16.07■□□□□ 0.16
SPG21-211ENST00000560564 ACTR1AP61163 376 aa16.07■□□□□ 0.16
SPG21-211ENST00000560564 MARK2Q7KZI7 788 aaKnown RBP16.07■□□□□ 0.16
SPG21-211ENST00000560564 KRT35Q92764 455 aa16.07■□□□□ 0.16
SPG21-211ENST00000560564 NAF1Q96HR8 494 aaKnown RBP16.07■□□□□ 0.16
SPG21-211ENST00000560564 TMEM74Q96NL1 305 aa16.07■□□□□ 0.16
SPG21-211ENST00000560564 PANX2Q96RD6 677 aa16.07■□□□□ 0.16
SPG21-211ENST00000560564 FAM83DQ9H4H8 585 aa16.07■□□□□ 0.16
SPG21-211ENST00000560564 ZFYVE1Q9HBF4 777 aa16.07■□□□□ 0.16
SPG21-211ENST00000560564 EPB41L5Q9HCM4 733 aa16.07■□□□□ 0.16
SPG21-211ENST00000560564 PKD2L2Q9NZM6 624 aa16.07■□□□□ 0.16
SPG21-211ENST00000560564 REXO2Q9Y3B8 237 aaKnown RBP16.07■□□□□ 0.16
SPG21-211ENST00000560564 SOWAHDA6NJG2 315 aa16.06■□□□□ 0.16
SPG21-211ENST00000560564 TMX2-CTNND1H3BSU7 103 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms