RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 GALNT13Q8IUC8 556 aa16.48■□□□□ 0.23
HERC1-207ENST00000560316 TBC1D10AQ9BXI6 508 aa16.48■□□□□ 0.23
HERC1-207ENST00000560316 SARS2Q9NP81 518 aaKnown RBP16.48■□□□□ 0.23
HERC1-207ENST00000560316 PRKAB1Q9Y478 270 aa16.48■□□□□ 0.23
HERC1-207ENST00000560316 MAP4K5Q9Y4K4 846 aa16.48■□□□□ 0.23
HERC1-207ENST00000560316 SHANK1Q9Y566 2161 aa16.48■□□□□ 0.23
HERC1-207ENST00000560316 ANKRD17O75179 2603 aaKnown RBP16.48■□□□□ 0.23
HERC1-207ENST00000560316 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.47■□□□□ 0.23
HERC1-207ENST00000560316 PIPSLA2A3N6 862 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 SIGLEC16A6NMB1 481 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 KIAA0754O94854 1291 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 CYP2A6P11509 494 aaPredicted RBP16.47■□□□□ 0.23
HERC1-207ENST00000560316 NSFP46459 744 aaKnown RBP16.47■□□□□ 0.23
HERC1-207ENST00000560316 AIF1P55008 147 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 GFERP55789 205 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 RPL7AP62424 266 aaKnown RBP16.47■□□□□ 0.23
HERC1-207ENST00000560316 DPTQ07507 201 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 SLC10A7Q0GE19 358 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 RFTN1Q14699 578 aaPredicted RBP16.47■□□□□ 0.23
HERC1-207ENST00000560316 CA9Q16790 459 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 EIF2S3LQ2VIR3 472 aaKnown RBP16.47■□□□□ 0.23
HERC1-207ENST00000560316 TECPR1Q7Z6L1 1165 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 TP53INP2Q8IXH6 220 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 NPWQ8N729 165 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 C3orf20Q8ND61 904 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 SPOCK2Q92563 424 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 STAMBPL1Q96FJ0 436 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 ELMO2Q96JJ3 720 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 MCEEQ96PE7 176 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 PSKH2Q96QS6 385 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 AGAP2Q99490 1192 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 ABCG8Q9H221 673 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 VPS16Q9H269 839 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 DONSONQ9NYP3 566 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 KIAA1468Q9P260 1216 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 RCOR3Q9P2K3 495 aaPredicted RBP16.47■□□□□ 0.23
HERC1-207ENST00000560316 TBC1D29Q9UFV1 150 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 MED13Q9UHV7 2174 aa16.47■□□□□ 0.23
HERC1-207ENST00000560316 PSMD11O00231 422 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 EEF2KO00418 725 aaKnown RBP16.46■□□□□ 0.23
HERC1-207ENST00000560316 INPP4BO15327 924 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 GADD45BO75293 160 aaPredicted RBP16.46■□□□□ 0.23
HERC1-207ENST00000560316 CREG1O75629 220 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 CLDN1O95832 211 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 CTPS1P17812 591 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 RENBPP51606 427 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 EPHA4P54764 986 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 SH3BP2P78314 561 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 IL10RBQ08334 325 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 TRAF2Q12933 501 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 MRPL49Q13405 166 aaKnown RBP16.46■□□□□ 0.23
HERC1-207ENST00000560316 SEMA5AQ13591 1074 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 LRP8Q14114 963 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 LBRQ14739 615 aaKnown RBP16.46■□□□□ 0.23
HERC1-207ENST00000560316 PRR30Q53SZ7 412 aaPredicted RBP16.46■□□□□ 0.23
HERC1-207ENST00000560316 IYDQ6PHW0 289 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 ADAMTSL4Q6UY14 1074 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 MAMDC2Q7Z304 686 aaPredicted RBP16.46■□□□□ 0.23
HERC1-207ENST00000560316 LZTR1Q8N653 840 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 SCAMP4Q969E2 229 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 SH3KBP1Q96B97 665 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 AP2M1Q96CW1 435 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 STN1Q9H668 368 aaKnown RBP16.46■□□□□ 0.23
HERC1-207ENST00000560316 NOD2Q9HC29 1040 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 ZNHIT2Q9UHR6 403 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 KCND3Q9UK17 655 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 PHTF1Q9UMS5 762 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 SRPK3Q9UPE1 567 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 AP4E1Q9UPM8 1137 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 KCNK6Q9Y257 313 aa16.46■□□□□ 0.23
HERC1-207ENST00000560316 PRRC2CQ9Y520 2896 aaKnown RBP16.45■□□□□ 0.22
HERC1-207ENST00000560316 TCRBV5S1A1TA0A578 114 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 SNX2O60749 519 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 SOCS5O75159 536 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 NDUFA10O95299 355 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 ASMTLO95671 621 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 DDAH2O95865 285 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 CALB1P05937 261 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 ERCC2P18074 760 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 HTR7P34969 479 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 SEPHS1P49903 392 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 CAMK4Q16566 473 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 DNAJC24Q6P3W2 148 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 TRIM72Q6ZMU5 477 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 CHST15Q7LFX5 561 aaPredicted RBP16.45■□□□□ 0.22
HERC1-207ENST00000560316 SLC9B2Q86UD5 537 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 PLXDC1Q8IUK5 500 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 RASGRP3Q8IV61 690 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 APLFQ8IW19 511 aaPredicted RBP16.45■□□□□ 0.22
HERC1-207ENST00000560316 PGBD5Q8N414 524 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 SMIM14Q96QK8 99 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 OR6C1Q96RD1 312 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 CNPY3Q9BT09 278 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 GANQ9H2C0 597 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 DHX35Q9H5Z1 703 aaKnown RBP16.45■□□□□ 0.22
HERC1-207ENST00000560316 CNOT8Q9UFF9 292 aaKnown RBP16.45■□□□□ 0.22
HERC1-207ENST00000560316 ZNF106Q9H2Y7 1883 aaKnown RBP16.45■□□□□ 0.22
HERC1-207ENST00000560316 ABCA12Q86UK0 2595 aa16.45■□□□□ 0.22
HERC1-207ENST00000560316 MN1Q10571 1320 aaPredicted RBP16.45■□□□□ 0.22
HERC1-207ENST00000560316 HIVEP3Q5T1R4 2406 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms