RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 MFSD11O43934 449 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 SERPINC1P01008 464 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 CD48P09326 243 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 CES1P23141 567 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 MPSTP25325 297 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 GARSP41250 739 aaKnown RBP17.3■□□□□ 0.36
CRTC3-208ENST00000560098 FASLGP48023 281 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 ZNF165P49910 485 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 ATP1A2P50993 1020 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 STC1P52823 247 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 EPHB1P54762 984 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 GALNT2Q10471 571 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 CCDC122Q5T0U0 273 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 ALG1LQ6GMV1 187 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 EXD1Q8NHP7 514 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 FAM71BQ8TC56 605 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 MAML1Q92585 1016 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 NKD1Q969G9 470 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 COX14Q96I36 57 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 AGAP2Q99490 1192 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 TMEM9Q9P0T7 183 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 DNPEPQ9ULA0 475 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 MATN3O15232 486 aa17.29■□□□□ 0.36
CRTC3-208ENST00000560098 CYP1A2P05177 515 aa17.29■□□□□ 0.36
CRTC3-208ENST00000560098 SSR1P43307 286 aaKnown RBP17.29■□□□□ 0.36
CRTC3-208ENST00000560098 DSC2Q02487 901 aa17.29■□□□□ 0.36
CRTC3-208ENST00000560098 IHHQ14623 411 aa17.29■□□□□ 0.36
CRTC3-208ENST00000560098 PAFAH1B3Q15102 231 aaKnown RBP17.29■□□□□ 0.36
CRTC3-208ENST00000560098 TIGD7Q6NT04 549 aaPredicted RBP17.29■□□□□ 0.36
CRTC3-208ENST00000560098 TMEM71Q6P5X7 295 aa17.29■□□□□ 0.36
CRTC3-208ENST00000560098 NRSN1Q8IZ57 195 aa17.29■□□□□ 0.36
CRTC3-208ENST00000560098 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.29■□□□□ 0.36
CRTC3-208ENST00000560098 SLC37A2Q8TED4 501 aa17.29■□□□□ 0.36
CRTC3-208ENST00000560098 SYN2Q92777 582 aaPredicted RBP17.29■□□□□ 0.36
CRTC3-208ENST00000560098 ART4Q93070 314 aa17.29■□□□□ 0.36
CRTC3-208ENST00000560098 SLC38A3Q99624 504 aa17.29■□□□□ 0.36
CRTC3-208ENST00000560098 RIOK2Q9BVS4 552 aaKnown RBP17.29■□□□□ 0.36
CRTC3-208ENST00000560098 DDA1Q9BW61 102 aa17.29■□□□□ 0.36
CRTC3-208ENST00000560098 TDRD1Q9BXT4 1180 aaKnown RBP17.29■□□□□ 0.36
CRTC3-208ENST00000560098 HAUS2Q9NVX0 235 aa17.29■□□□□ 0.36
CRTC3-208ENST00000560098 CHKBQ9Y259 395 aa17.29■□□□□ 0.36
CRTC3-208ENST00000560098 B3GALT1Q9Y5Z6 326 aa17.29■□□□□ 0.36
CRTC3-208ENST00000560098 TRBV23OR9-2A0A075B6M9 112 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 MYO1FO00160 1098 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 INPP4BO15327 924 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 ASMTLO95671 621 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 UGT1A3P35503 534 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 CSRP3P50461 194 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 ARSEP51690 589 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 DPYSL3Q14195 570 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 HADHQ16836 314 aaKnown RBP17.28■□□□□ 0.36
CRTC3-208ENST00000560098 NCBP2-AS2Q69YL0 99 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 ZNF761Q86XN6 746 aaPredicted RBP17.28■□□□□ 0.36
CRTC3-208ENST00000560098 RAVER1Q8IY67 606 aaKnown RBP17.28■□□□□ 0.36
CRTC3-208ENST00000560098 SFRP1Q8N474 314 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 IL22RA1Q8N6P7 574 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 OR10G6Q8NH81 332 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 AHCYL2Q96HN2 611 aaKnown RBP17.28■□□□□ 0.36
CRTC3-208ENST00000560098 FUCA2Q9BTY2 467 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 SLC12A9Q9BXP2 914 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 ASPSCR1Q9BZE9 553 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 ZMYND15Q9H091 742 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 RBM22Q9NW64 420 aaKnown RBP eCLIP17.28■□□□□ 0.36
CRTC3-208ENST00000560098 SLC39A1Q9NY26 324 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 PDP2Q9P2J9 529 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 AMACRQ9UHK6 382 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 TTLL3Q9Y4R7 772 aa17.28■□□□□ 0.36
CRTC3-208ENST00000560098 A0A1W2PQJ5 194 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 B4E171 279 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 MAP3K6O95382 1288 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 CLDN7O95471 211 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 EML2O95834 649 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 SERPING1P05155 500 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 CA4P22748 312 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 CCNCP24863 283 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 TSPAN7P41732 249 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 NFKB2Q00653 900 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 IFI16Q16666 785 aaKnown RBP17.27■□□□□ 0.35
CRTC3-208ENST00000560098 FAM129CQ86XR2 697 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 ARRDC2Q8TBH0 407 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 FATE1Q969F0 183 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 COL26A1Q96A83 441 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 TSGA13Q96PP4 275 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 TRIM4Q9C037 500 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 OCIAD1Q9NX40 245 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 VPS18Q9P253 973 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 ZNHIT2Q9UHR6 403 aa17.27■□□□□ 0.35
CRTC3-208ENST00000560098 A0A087X0T9 212 aa17.26■□□□□ 0.35
CRTC3-208ENST00000560098 EFCAB7A8K855 629 aa17.26■□□□□ 0.35
CRTC3-208ENST00000560098 DUX1O43812 170 aa17.26■□□□□ 0.35
CRTC3-208ENST00000560098 DNAJC6O75061 913 aa17.26■□□□□ 0.35
CRTC3-208ENST00000560098 PPFIA2O75334 1257 aa17.26■□□□□ 0.35
CRTC3-208ENST00000560098 PRLP01236 227 aa17.26■□□□□ 0.35
CRTC3-208ENST00000560098 FAM228BP0C875 321 aa17.26■□□□□ 0.35
CRTC3-208ENST00000560098 LIFP15018 202 aa17.26■□□□□ 0.35
CRTC3-208ENST00000560098 PPM1FP49593 454 aaPredicted RBP17.26■□□□□ 0.35
CRTC3-208ENST00000560098 RAB15P59190 212 aa17.26■□□□□ 0.35
CRTC3-208ENST00000560098 RPL26P61254 145 aaKnown RBP17.26■□□□□ 0.35
CRTC3-208ENST00000560098 CLCA4Q14CN2 919 aa17.26■□□□□ 0.35
CRTC3-208ENST00000560098 IQCB1Q15051 598 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms