RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 TRIM7Q9C029 511 aa9.12□□□□□ -0.95
HDDC3-204ENST00000559834 ABCG8Q9H221 673 aa9.12□□□□□ -0.95
HDDC3-204ENST00000559834 TRIT1Q9H3H1 467 aaKnown RBP9.12□□□□□ -0.95
HDDC3-204ENST00000559834 ASH1LQ9NR48 2969 aaKnown RBP9.12□□□□□ -0.95
HDDC3-204ENST00000559834 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.12□□□□□ -0.95
HDDC3-204ENST00000559834 OCIAD1Q9NX40 245 aa9.12□□□□□ -0.95
HDDC3-204ENST00000559834 PDP2Q9P2J9 529 aa9.12□□□□□ -0.95
HDDC3-204ENST00000559834 ZNHIT2Q9UHR6 403 aa9.12□□□□□ -0.95
HDDC3-204ENST00000559834 SETXQ7Z333 2677 aaKnown RBP9.12□□□□□ -0.95
HDDC3-204ENST00000559834 SPTA1P02549 2419 aa9.12□□□□□ -0.95
HDDC3-204ENST00000559834 ANKRD36A6QL64 1941 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 PIEZO2Q9H5I5 2752 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 OR5K4A6NMS3 321 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 GOLGA6L22H0YM25 854 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 DDX3XO00571 662 aaKnown RBP eCLIP9.11□□□□□ -0.956e-21■■■■□ 21.8
HDDC3-204ENST00000559834 FZD6O60353 706 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 PDHA1P08559 390 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 RARAP10276 462 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 IL1R2P27930 398 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 PRKCIP41743 596 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 POLE2P56282 527 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 MC2RQ01718 297 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 HHEXQ03014 270 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 TLE1Q04724 770 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 KRT81Q14533 505 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 NCAPHQ15003 741 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 SMTNL2Q2TAL5 461 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 COLEC12Q5KU26 742 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 SNAP47Q5SQN1 464 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 ANKS6Q68DC2 871 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 TIGD7Q6NT04 549 aaPredicted RBP9.11□□□□□ -0.95
HDDC3-204ENST00000559834 IYDQ6PHW0 289 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 CEACAM20Q6UY09 585 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 APTXQ7Z2E3 356 aaKnown RBP9.11□□□□□ -0.95
HDDC3-204ENST00000559834 ZNF571Q7Z3V5 609 aaPredicted RBP9.11□□□□□ -0.95
HDDC3-204ENST00000559834 KDELC2Q7Z4H8 507 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 SLC9B2Q86UD5 537 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 TEX26Q8N6G2 289 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 AVL9Q8NBF6 648 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 NCSTNQ92542 709 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 SCAMP4Q969E2 229 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 SLC45A3Q96JT2 553 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 GBP4Q96PP9 640 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 POLR1EQ9GZS1 481 aaKnown RBP9.11□□□□□ -0.95
HDDC3-204ENST00000559834 ISCUQ9H1K1 167 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 EPB41L1Q9H4G0 881 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 RMI1Q9H9A7 625 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 GPN2Q9H9Y4 310 aaPredicted RBP9.11□□□□□ -0.95
HDDC3-204ENST00000559834 SARS2Q9NP81 518 aaKnown RBP9.11□□□□□ -0.95
HDDC3-204ENST00000559834 NT5MQ9NPB1 228 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 RTN4Q9NQC3 1192 aaKnown RBP9.11□□□□□ -0.95
HDDC3-204ENST00000559834 FBXO8Q9NRD0 319 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 ETNK2Q9NVF9 386 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 VPS18Q9P253 973 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 RCOR3Q9P2K3 495 aaPredicted RBP9.11□□□□□ -0.95
HDDC3-204ENST00000559834 IP6K2Q9UHH9 426 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 CD84Q9UIB8 345 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 ANAPC2Q9UJX6 822 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 PILRAQ9UKJ1 303 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 PLEKHM1Q9Y4G2 1056 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 ST14Q9Y5Y6 855 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 CFAP46Q8IYW2 2715 aa9.11□□□□□ -0.95
HDDC3-204ENST00000559834 MYO18BQ8IUG5 2567 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 A0A0J9YYE9 177 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 SMTNL1A8MU46 457 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 A8MU76 341 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 INPP4BO15327 924 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 SOD1P00441 154 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 TRBC1P01850 177 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 CSF2RBP32927 897 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 ZNF165P49910 485 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 ARSDP51689 593 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 STC1P52823 247 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 EPHA4P54764 986 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 RPL26P61254 145 aaKnown RBP9.1□□□□□ -0.95
HDDC3-204ENST00000559834 ABHD18Q0P651 414 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 SEPT6Q14141 434 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 PTPRRQ15256 657 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 HADHQ16836 314 aaKnown RBP9.1□□□□□ -0.95
HDDC3-204ENST00000559834 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.1□□□□□ -0.95
HDDC3-204ENST00000559834 RFLNAQ6ZTI6 216 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 CHST15Q7LFX5 561 aaPredicted RBP9.1□□□□□ -0.95
HDDC3-204ENST00000559834 LYSMD3Q7Z3D4 306 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 ARHGAP22Q7Z5H3 698 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 PTRH1Q86Y79 214 aaKnown RBP9.1□□□□□ -0.95
HDDC3-204ENST00000559834 BMPERQ8N8U9 685 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 CCHCR1Q8TD31 782 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 SLC37A2Q8TED4 501 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 APOBEC4Q8WW27 367 aaKnown RBP9.1□□□□□ -0.95
HDDC3-204ENST00000559834 RTP4Q96DX8 246 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 COX14Q96I36 57 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 HERPUD2Q9BSE4 406 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 RIOK2Q9BVS4 552 aaKnown RBP9.1□□□□□ -0.95
HDDC3-204ENST00000559834 HSD3B7Q9H2F3 369 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 PCDH18Q9HCL0 1135 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 RBM22Q9NW64 420 aaKnown RBP eCLIP9.1□□□□□ -0.95
HDDC3-204ENST00000559834 TMEM9Q9P0T7 183 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 AMACRQ9UHK6 382 aa9.1□□□□□ -0.95
HDDC3-204ENST00000559834 RPL26L1Q9UNX3 145 aaKnown RBP9.1□□□□□ -0.95
HDDC3-204ENST00000559834 BZW2Q9Y6E2 419 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms