RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ATF6P18850 670 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 UGT1A6P19224 532 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 SOX11P35716 441 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 GRIA3P42263 894 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 SLC11A1P49279 550 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 ATP4BP51164 291 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 ZNF140P52738 457 aaPredicted RBP10□□□□□ -0.81
LRRC28-216ENST00000559819 GNA12Q03113 381 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 NADK2Q4G0N4 442 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 SAMD4BQ5PRF9 694 aaKnown RBP10□□□□□ -0.81
LRRC28-216ENST00000559819 RBM44Q6ZP01 1051 aaKnown RBP10□□□□□ -0.81
LRRC28-216ENST00000559819 GLT6D1Q7Z4J2 308 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 MYO1HQ8N1T3 1032 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 FBXO39Q8N4B4 442 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 NCSTNQ92542 709 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 GPR21Q99679 349 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 CIB1Q99828 191 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 CINPQ9BW66 212 aaPredicted RBP10□□□□□ -0.81
LRRC28-216ENST00000559819 SLC2A11Q9BYW1 496 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 BPIFA1Q9NP55 256 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 RNF186Q9NXI6 227 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 SQORQ9Y6N5 450 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 SLC38A8A6NNN8 435 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 PLOD2O00469 737 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 KIF3CO14782 793 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 SCAMP3O14828 347 aaKnown RBP10□□□□□ -0.81
LRRC28-216ENST00000559819 ADAM12O43184 909 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 GPR39O43194 453 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 CA12O43570 354 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 TSPAN3O60637 253 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 CLPTM1O96005 669 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 PENKP01210 267 aaPredicted RBP10□□□□□ -0.81
LRRC28-216ENST00000559819 HGFP14210 728 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 OGNP20774 298 aaKnown RBP10□□□□□ -0.81
LRRC28-216ENST00000559819 CST5P28325 142 aaPredicted RBP10□□□□□ -0.81
LRRC28-216ENST00000559819 DIO3P55073 304 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 CLCQ05315 142 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 TRAP1Q12931 704 aaKnown RBP10□□□□□ -0.81
LRRC28-216ENST00000559819 IKBKEQ14164 716 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 TYSND1Q2T9J0 566 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 ARMC3Q5W041 872 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 PIANPQ8IYJ0 282 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 EFHBQ8N7U6 833 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 DCBLD1Q8N8Z6 715 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 PCSK9Q8NBP7 692 aaKnown RBP10□□□□□ -0.81
LRRC28-216ENST00000559819 LPCAT1Q8NF37 534 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 MGME1Q9BQP7 344 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 TFB2MQ9H5Q4 396 aaKnown RBP10□□□□□ -0.81
LRRC28-216ENST00000559819 NLE1Q9NVX2 485 aaPredicted RBP10□□□□□ -0.81
LRRC28-216ENST00000559819 RNF11Q9Y3C5 154 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 ASB1Q9Y576 335 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 PCDHGC4Q9Y5F7 938 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 A0A1B0GVG6 124 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 OR6C75A6NL08 312 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 ACSL4O60488 711 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 NIPSNAP2O75323 286 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 FAM58BPP0C7Q3 252 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 RPL17P18621 184 aaKnown RBP9.99□□□□□ -0.81
LRRC28-216ENST00000559819 CES1P23141 567 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 SLC7A1P30825 629 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 ACADVLP49748 655 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 CYTH1Q15438 398 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 MAP7D1Q3KQU3 841 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 PSAPL1Q6NUJ1 521 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 UGT3A1Q6NUS8 523 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 FUT10Q6P4F1 479 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 C16orf59Q7L2K0 433 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 DHFR2Q86XF0 187 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 DENND1CQ8IV53 801 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 MIER2Q8N344 545 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 SIDT2Q8NBJ9 832 aaKnown RBP9.99□□□□□ -0.81
LRRC28-216ENST00000559819 DIS3LQ8TF46 1054 aaKnown RBP9.99□□□□□ -0.81
LRRC28-216ENST00000559819 BCL7CQ8WUZ0 217 aaPredicted RBP9.99□□□□□ -0.81
LRRC28-216ENST00000559819 CANT1Q8WVQ1 401 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 WBP2Q969T9 261 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 PPWD1Q96BP3 646 aaKnown RBP9.99□□□□□ -0.81
LRRC28-216ENST00000559819 TEX37Q96LM6 180 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 SH3GL3Q99963 347 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 GPATCH1Q9BRR8 931 aaKnown RBP9.99□□□□□ -0.81
LRRC28-216ENST00000559819 MRPL40Q9NQ50 206 aaKnown RBP9.99□□□□□ -0.81
LRRC28-216ENST00000559819 CMTM6Q9NX76 183 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 UBA2Q9UBT2 640 aaPredicted RBP9.99□□□□□ -0.81
LRRC28-216ENST00000559819 FKBPLQ9UIM3 349 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 H3BNC9 293 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 BTN3A1O00481 513 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 VILLO15195 856 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 KERAO60938 352 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 NDUFS3O75489 264 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 CRCPO75575 148 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 TNFAIP8O95379 198 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 PRLP01236 227 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 EPOP01588 193 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 FGF4P08620 206 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 ZDHHC11BP0C7U3 371 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 IRF1P10914 325 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 OXCT1P55809 520 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 INHBEP58166 350 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 RING1Q06587 406 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 GPR17Q13304 367 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 PTPRNQ16849 979 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms