RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ATP13A5Q4VNC0 1218 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 CCDC70Q6NSX1 233 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 LRRC8BQ6P9F7 803 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 FAM151BQ6UXP7 276 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 C4orf22Q6V702 233 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 PRR23CQ6ZRP0 262 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 ZNF765Q7L2R6 523 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 LINC00523Q86TU6 105 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 PPIL6Q8IXY8 311 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 RBFAQ8N0V3 343 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 NDUFAF2Q8N183 169 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 MMGT1Q8N4V1 131 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 MCUQ8NE86 351 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 PDXPQ96GD0 296 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 COX14Q96I36 57 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 SIGLEC10Q96LC7 697 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 APOOQ9BUR5 198 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 FAM83DQ9H4H8 585 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 FAM96AQ9H5X1 160 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 UGT1A7Q9HAW7 530 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 UGT1A10Q9HAW8 530 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 UGT1A8Q9HAW9 530 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 MRPL40Q9NQ50 206 aaKnown RBP10.84□□□□□ -0.67
TPM1-217ENST00000559108 CHRAC1Q9NRG0 131 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 HACD3Q9P035 362 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 TPX2Q9ULW0 747 aaKnown RBP10.84□□□□□ -0.67
TPM1-217ENST00000559108 SLC6A14Q9UN76 642 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 TCAF1Q9Y4C2 921 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 ST14Q9Y5Y6 855 aa10.84□□□□□ -0.67
TPM1-217ENST00000559108 CCDC162PA2VCL2 907 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 GOLGA6CA6NDK9 693 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 GOLGA6BA6NDN3 693 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 EFCAB8A8MWE9 144 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 ARHGAP33O14559 1287 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 FPGTO14772 594 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 MTX2O75431 263 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 GOLGA6DP0CG33 693 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 NUDT1P36639 197 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 PLA2G5P39877 138 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 ACVR1Q04771 509 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 SEMA3AQ14563 771 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 FASTKD3Q14CZ7 662 aaKnown RBP10.83□□□□□ -0.68
TPM1-217ENST00000559108 ZNF423Q2M1K9 1284 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 ALG11Q2TAA5 492 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 HLA-BQ31612 363 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 UBAP2Q5T6F2 1119 aaKnown RBP10.83□□□□□ -0.68
TPM1-217ENST00000559108 RAET1GQ6H3X3 334 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 ADAMTSL4Q6UY14 1074 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 SYDE1Q6ZW31 735 aaPredicted RBP10.83□□□□□ -0.68
TPM1-217ENST00000559108 KANSL1Q7Z3B3 1105 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 IQCHQ86VS3 1027 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 SPNS2Q8IVW8 549 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 NRSN1Q8IZ57 195 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 UNC5BQ8IZJ1 945 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 DNAAF3Q8N9W5 541 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 OR1E3Q8WZA6 343 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 KLHDC7BQ96G42 594 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 TBATAQ96M53 351 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 FCRL3Q96P31 734 aaPredicted RBP10.83□□□□□ -0.68
TPM1-217ENST00000559108 RANBP9Q96S59 729 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 ERP44Q9BS26 406 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 FRMD8Q9BZ67 464 aaPredicted RBP10.83□□□□□ -0.68
TPM1-217ENST00000559108 TRABDQ9H4I3 376 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 TREX1Q9NSU2 369 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 NLE1Q9NVX2 485 aaPredicted RBP10.83□□□□□ -0.68
TPM1-217ENST00000559108 GOLGA6AQ9NYA3 693 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 PKD2L2Q9NZM6 624 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 SUSD2Q9UGT4 822 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 FEZ2Q9UHY8 353 aaPredicted RBP10.83□□□□□ -0.68
TPM1-217ENST00000559108 TMEM98Q9Y2Y6 226 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 PIKFYVEQ9Y2I7 2098 aa10.83□□□□□ -0.68
TPM1-217ENST00000559108 CABIN1Q9Y6J0 2220 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 SPTY2D1-AS1A0A0U1RR47 76 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 FAM187AA6NFU0 413 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 KHNYNO15037 678 aaKnown RBP10.82□□□□□ -0.68
TPM1-217ENST00000559108 SDC3O75056 442 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 LRP3O75074 770 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 CEACAM5P06731 702 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 GIMD1P0DJR0 217 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 MYCLP1P12525 358 aaPredicted RBP10.82□□□□□ -0.68
TPM1-217ENST00000559108 GNSP15586 552 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 TSHRP16473 764 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 TEAD1P28347 426 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 ECHS1P30084 290 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 FOXN2P32314 431 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 SPAM1P38567 509 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 GPR1P46091 355 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 KIAA1024LP59773 190 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 CDK16Q00536 496 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 B4GALNT1Q00973 533 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 DHX9Q08211 1270 aaKnown RBP10.82□□□□□ -0.68
TPM1-217ENST00000559108 BNIP3Q12983 259 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 NFATC4Q14934 902 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 TCEA2Q15560 299 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 HP1BP3Q5SSJ5 553 aaPredicted RBP10.82□□□□□ -0.68
TPM1-217ENST00000559108 TSTD2Q5T7W7 516 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 PSAPL1Q6NUJ1 521 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 XKR5Q6UX68 686 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 MACC1Q6ZN28 852 aa10.82□□□□□ -0.68
TPM1-217ENST00000559108 ALYREFQ86V81 257 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms