RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 MTTPP55157 894 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 MS4A2Q01362 244 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 TAF1AQ15573 450 aaPredicted RBP10.58□□□□□ -0.72
CUX1-217ENST00000558836 AGKQ53H12 422 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 ANO7Q6IWH7 933 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 IZUMO2Q6UXV1 221 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 GAREM2Q75VX8 874 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 BIRC8Q96P09 236 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 ABCG8Q9H221 673 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 EVLQ9UI08 416 aaPredicted RBP10.58□□□□□ -0.72
CUX1-217ENST00000558836 TIMM22Q9Y584 194 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 BTN3A1O00481 513 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 UBDO15205 165 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 MAP3K7O43318 606 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 SMIM24O75264 130 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 CDK14O94921 469 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 HERVK_113P63132 956 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 CEACAM7Q14002 265 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 PAOXQ6QHF9 649 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 LYSMD3Q7Z3D4 306 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 SLC22A9Q8IVM8 553 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 MFN1Q8IWA4 741 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 DDIASQ8IXT1 998 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 PPFIBP2Q8ND30 876 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 GPR150Q8NGU9 434 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 MICAL1Q8TDZ2 1067 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 EEF1AKMT1Q8WVE0 214 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 MYLIPQ8WY64 445 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 MAELQ96JY0 434 aaKnown RBP10.58□□□□□ -0.72
CUX1-217ENST00000558836 SLC39A3Q9BRY0 314 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 ERVK-6Q9BXR3 956 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 WDR41Q9HAD4 459 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 RNF112Q9ULX5 631 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 ASB1Q9Y576 335 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 DNAJC15Q9Y5T4 150 aa10.58□□□□□ -0.72
CUX1-217ENST00000558836 A0A1W2PRU2 124 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 GREM1O60565 184 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 CLASP2O75122 1294 aaKnown RBP10.57□□□□□ -0.72
CUX1-217ENST00000558836 LINC00032P0C843 101 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 RAG1P15918 1043 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 EEF1DP29692 281 aaKnown RBP10.57□□□□□ -0.72
CUX1-217ENST00000558836 ACBD5Q5T8D3 534 aaPredicted RBP10.57□□□□□ -0.72
CUX1-217ENST00000558836 CNKSR3Q6P9H4 555 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 FAM151BQ6UXP7 276 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 HERC6Q8IVU3 1022 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 BBS7Q8IWZ6 715 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 CPNE9Q8IYJ1 553 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 CPSF7Q8N684 471 aaKnown RBP10.57□□□□□ -0.72
CUX1-217ENST00000558836 OVCA2Q8WZ82 227 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 CCDC126Q96EE4 140 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 ATOH8Q96SQ7 321 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 YME1L1Q96TA2 773 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 IL21Q9HBE4 155 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 TAS2R13Q9NYV9 303 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 ADA2Q9NZK5 511 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 LHX3Q9UBR4 397 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 ANGPTL2Q9UKU9 493 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 TBX21Q9UL17 535 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 SPTBN5Q9NRC6 3674 aaKnown RBP10.57□□□□□ -0.72
CUX1-217ENST00000558836 TTC36A6NLP5 189 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 TGM5O43548 720 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 ECI2O75521 394 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 CNPP09543 421 aaKnown RBP10.57□□□□□ -0.72
CUX1-217ENST00000558836 RAB33AQ14088 237 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 TYSND1Q2T9J0 566 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 MMEL1Q495T6 779 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 PITRM1Q5JRX3 1037 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 CTSL3PQ5NE16 218 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 TPGS2Q68CL5 300 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 UGT3A1Q6NUS8 523 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 NCEH1Q6PIU2 408 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 AFTPHQ6ULP2 937 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 CHST9Q7L1S5 443 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 LMNTD2Q8IXW0 634 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 CLDN19Q8N6F1 224 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 CCDC28BQ9BUN5 200 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 ADGRE3Q9BY15 652 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 GPR63Q9BZJ6 419 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 IL1RL2Q9HB29 575 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 MRPL17Q9NRX2 175 aaKnown RBP10.57□□□□□ -0.72
CUX1-217ENST00000558836 SPG21Q9NZD8 308 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 CFAP97Q9P2B7 532 aa10.57□□□□□ -0.72
CUX1-217ENST00000558836 GMPR2Q9P2T1 348 aaKnown RBP10.57□□□□□ -0.72
CUX1-217ENST00000558836 LUC7L3O95232 432 aaKnown RBP10.56□□□□□ -0.72
CUX1-217ENST00000558836 OGNP20774 298 aaKnown RBP10.56□□□□□ -0.72
CUX1-217ENST00000558836 PEX2P28328 305 aa10.56□□□□□ -0.72
CUX1-217ENST00000558836 PRDX6P30041 224 aa10.56□□□□□ -0.72
CUX1-217ENST00000558836 MRPS22P82650 360 aaKnown RBP10.56□□□□□ -0.72
CUX1-217ENST00000558836 RALGDSQ12967 914 aa10.56□□□□□ -0.72
CUX1-217ENST00000558836 FASTKQ14296 549 aaKnown RBP10.56□□□□□ -0.72
CUX1-217ENST00000558836 GRB7Q14451 532 aa10.56□□□□□ -0.72
CUX1-217ENST00000558836 C18orf21Q32NC0 220 aaPredicted RBP10.56□□□□□ -0.72
CUX1-217ENST00000558836 LRRC73Q5JTD7 316 aa10.56□□□□□ -0.72
CUX1-217ENST00000558836 GALNT7Q86SF2 657 aa10.56□□□□□ -0.72
CUX1-217ENST00000558836 PELI3Q8N2H9 469 aa10.56□□□□□ -0.72
CUX1-217ENST00000558836 C19orf60Q96EN9 201 aa10.56□□□□□ -0.72
CUX1-217ENST00000558836 CDK15Q96Q40 435 aa10.56□□□□□ -0.72
CUX1-217ENST00000558836 HBEGFQ99075 208 aa10.56□□□□□ -0.72
CUX1-217ENST00000558836 DDX50Q9BQ39 737 aaKnown RBP10.56□□□□□ -0.72
CUX1-217ENST00000558836 BOCQ9BWV1 1114 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms