RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CCDC181Q5TID7 509 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 USP53Q70EK8 1073 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 PDZD3Q86UT5 571 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 ZNF761Q86XN6 746 aaPredicted RBP12.45□□□□□ -0.42
SMAD3-208ENST00000558827 RCOR2Q8IZ40 523 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 GPBAR1Q8TDU6 330 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 TFB1MQ8WVM0 346 aaKnown RBP12.45□□□□□ -0.42
SMAD3-208ENST00000558827 FGF11Q92914 225 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 EID2BQ96D98 161 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 HIC2Q96JB3 615 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 PANX2Q96RD6 677 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 GFM1Q96RP9 751 aaKnown RBP12.45□□□□□ -0.42
SMAD3-208ENST00000558827 DESI2Q9BSY9 194 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 SLC25A51Q9H1U9 297 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 LRRN3Q9H3W5 708 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 FAM83DQ9H4H8 585 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 BPIFA1Q9NP55 256 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 LRIT1Q9P2V4 623 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 TRIM10Q9UDY6 481 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 ZNHIT2Q9UHR6 403 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 CNOT6Q9ULM6 557 aaKnown RBP12.45□□□□□ -0.42
SMAD3-208ENST00000558827 SPO11Q9Y5K1 396 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 ZFHX4Q86UP3 3567 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 COL27A1Q8IZC6 1860 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-208ENST00000558827 MACROD2A1Z1Q3 448 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 H7C0C1 242 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 AURKAO14965 403 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 BUD23O43709 281 aaKnown RBP12.44□□□□□ -0.42
SMAD3-208ENST00000558827 ECEL1O95672 775 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 ZNF30P17039 623 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 ALDH4A1P30038 563 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 CD68P34810 354 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-208ENST00000558827 ACTN2P35609 894 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 CHRNA4P43681 627 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 ATP5OP48047 213 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 PPM1FP49593 454 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-208ENST00000558827 PDX1P52945 283 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 HADHBP55084 474 aaKnown RBP12.44□□□□□ -0.42
SMAD3-208ENST00000558827 CDK18Q07002 472 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 DPTQ07507 201 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 ILF3Q12906 894 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMAD3-208ENST00000558827 BIRC2Q13490 618 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 PRKD1Q15139 912 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-208ENST00000558827 TAZQ16635 292 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 TFDP3Q5H9I0 405 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 OGFOD3Q6PK18 319 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 ADAMTSL4Q6UY14 1074 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 LRRC69Q6ZNQ3 347 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 PID1Q7Z2X4 250 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 KIAA1328Q86T90 577 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 TMTC1Q8IUR5 882 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 CCNJLQ8IV13 435 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 KATNAL2Q8IYT4 538 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 NRSN1Q8IZ57 195 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 CACTIN-AS1Q8N1I8 211 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 CCHCR1Q8TD31 782 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 P3H4Q92791 437 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 TEKT5Q96M29 485 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 OR2M4Q96R27 311 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 TRIB3Q96RU7 358 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 SPATA16Q9BXB7 569 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 ADGRE3Q9BY15 652 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 GSDMCQ9BYG8 508 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 GPR63Q9BZJ6 419 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 POLR1BQ9H9Y6 1135 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 KCTD5Q9NXV2 234 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 PKD2L2Q9NZM6 624 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 KLHL8Q9P2G9 620 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-208ENST00000558827 SLC17A4Q9Y2C5 497 aa12.44□□□□□ -0.42
SMAD3-208ENST00000558827 PTPRQQ9UMZ3 2332 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 A0A0A6YYK5 440 aaPredicted RBP12.43□□□□□ -0.42
SMAD3-208ENST00000558827 RHPN2P1A8MT19 583 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 NTN3O00634 580 aaPredicted RBP12.43□□□□□ -0.42
SMAD3-208ENST00000558827 B4GAT1O43505 415 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 SNX2O60749 519 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 MTX2O75431 263 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 TNFSF15O95150 251 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 EML2O95834 649 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 IVLP07476 585 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 ABCG1P45844 678 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 LSSP48449 732 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 WNT3AP56704 352 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 RPL26P61254 145 aaKnown RBP12.43□□□□□ -0.42
SMAD3-208ENST00000558827 HLTFQ14527 1009 aaKnown RBP eCLIP12.43□□□□□ -0.42
SMAD3-208ENST00000558827 TBC1D25Q3MII6 688 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 PYCR3Q53H96 274 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 CERCAMQ5T4B2 595 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 NKAIN2Q5VXU1 208 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 CHST15Q7LFX5 561 aaPredicted RBP12.43□□□□□ -0.42
SMAD3-208ENST00000558827 TMPRSS9Q7Z410 1059 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 VSIG1Q86XK7 387 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 ZNF567Q8N184 647 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 ARL14Q8N4G2 192 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 GPR26Q8NDV2 337 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 IPMKQ8NFU5 416 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 EXD1Q8NHP7 514 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 ZFYVE1Q9HBF4 777 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 RDH14Q9HBH5 336 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 LUC7LQ9NQ29 371 aaKnown RBP12.43□□□□□ -0.42
SMAD3-208ENST00000558827 PACSIN2Q9UNF0 486 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms