RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 PIWIL2Q8TC59 973 aaKnown RBP12.91□□□□□ -0.34
SMAD3-207ENST00000558763 FAM45AQ8TCE6 357 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 SCG3Q8WXD2 468 aaKnown RBP12.91□□□□□ -0.34
SMAD3-207ENST00000558763 BIRC8Q96P09 236 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 AARSD1Q9BTE6 412 aaKnown RBP12.91□□□□□ -0.34
SMAD3-207ENST00000558763 MRPL46Q9H2W6 279 aaKnown RBP12.91□□□□□ -0.34
SMAD3-207ENST00000558763 BPIFA1Q9NP55 256 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 SLCO3A1Q9UIG8 710 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 FBXO10Q9UK96 956 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 DNAJC16Q9Y2G8 782 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 SERPINB3P29508 390 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 MC4RP32245 332 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 CA5AP35218 305 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 BCL2L1Q07817 233 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 RUNX3Q13761 415 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 CSHL1Q14406 222 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 LIPMQ5VYY2 423 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 TTC7BQ86TV6 843 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 C12orf40Q86WS4 652 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 CPA6Q8N4T0 437 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 PPP1R14CQ8TAE6 165 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 TSPAN17Q96FV3 270 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 MRPL57Q9BQC6 102 aaKnown RBP12.9□□□□□ -0.34
SMAD3-207ENST00000558763 GPAMQ9HCL2 828 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 ACSS2Q9NR19 701 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 HEY2Q9UBP5 337 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 MID2Q9UJV3 735 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 TICRRQ7Z2Z1 1910 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 KIAA1549LQ6ZVL6 1849 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 PIKFYVEQ9Y2I7 2098 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 CAPN8A6NHC0 703 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 TMEM114B3SHH9 223 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 ARNTLO00327 626 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 LTA4HP09960 611 aaKnown RBP12.9□□□□□ -0.34
SMAD3-207ENST00000558763 CCDC166P0CW27 439 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 KITP10721 976 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 ZNF37AP17032 561 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-207ENST00000558763 SLC26A3P40879 764 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 MAGEA9P43362 315 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 CCR10P46092 362 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 SLC12A2P55011 1212 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 AQP5P55064 265 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 PFKPQ01813 784 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 ASRGL1Q7L266 308 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 TBC1D1Q86TI0 1168 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-207ENST00000558763 ALYREFQ86V81 257 aaKnown RBP12.9□□□□□ -0.34
SMAD3-207ENST00000558763 GRIN3AQ8TCU5 1115 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 MRGPRX3Q96LB0 322 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 LYSMD1Q96S90 227 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 TCF12Q99081 682 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 EBF4Q9BQW3 602 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 CEP44Q9C0F1 390 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 ATP13A3Q9H7F0 1226 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 PNPOQ9NVS9 261 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 HAO1Q9UJM8 370 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 CAPN7Q9Y6W3 813 aa12.9□□□□□ -0.34
SMAD3-207ENST00000558763 NEMP2A6NFY4 417 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 STX7O15400 261 aaKnown RBP12.89□□□□□ -0.35
SMAD3-207ENST00000558763 HOXC11O43248 304 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-207ENST00000558763 UNC5CO95185 931 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 CHRNGP07510 517 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 HNF1BP35680 557 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 SKIV2L2P42285 1042 aaKnown RBP12.89□□□□□ -0.35
SMAD3-207ENST00000558763 KCNC1P48547 511 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 ILF2Q12905 390 aaKnown RBP12.89□□□□□ -0.35
SMAD3-207ENST00000558763 GEN1Q17RS7 908 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 MYLK3Q32MK0 819 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 FAM91A1Q658Y4 838 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 NAIF1Q69YI7 327 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-207ENST00000558763 DPY19L3Q6ZPD9 716 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 CCDC91Q7Z6B0 441 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 LSMEM2Q8N112 164 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 SLC44A3Q8N4M1 653 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 ZNF781Q8N8C0 355 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 FRS2Q8WU20 508 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 PTERQ96BW5 349 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 CCDC97Q96F63 343 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-207ENST00000558763 SCYL1Q96KG9 808 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 TSNARE1Q96NA8 513 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 C19orf43Q9BQ61 176 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 DRC3Q9H069 523 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 POPDC3Q9HBV1 291 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 PPIL1Q9Y3C6 166 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 TCF20Q9UGU0 1960 aaKnown RBP12.89□□□□□ -0.35
SMAD3-207ENST00000558763 NPIPB15A6NHN6 443 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-207ENST00000558763 OR1I1O60431 355 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 H2AFYO75367 372 aaKnown RBP12.89□□□□□ -0.35
SMAD3-207ENST00000558763 CISD3P0C7P0 127 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 GJA4P35212 333 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 SOX9P48436 509 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 CCNHP51946 323 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-207ENST00000558763 EPHB1P54762 984 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 SNRPD1P62314 119 aaKnown RBP12.89□□□□□ -0.35
SMAD3-207ENST00000558763 ECT2LQ008S8 904 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 MESP2Q0VG99 397 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 DMC1Q14565 340 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 SETDB1Q15047 1291 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 FAM83EQ2M2I3 478 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 GAB4Q2WGN9 574 aa12.89□□□□□ -0.35
SMAD3-207ENST00000558763 ITPRIPL2Q3MIP1 535 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms