RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 GALNT6Q8NCL4 622 aa17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 AP2M1Q96CW1 435 aa17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 PSKH2Q96QS6 385 aa17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 CASS4Q9NQ75 786 aa17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 KIAA1468Q9P260 1216 aa17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 ZNHIT2Q9UHR6 403 aa17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 CD84Q9UIB8 345 aa17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 TNRC6AQ8NDV7 1962 aaKnown RBP17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 HTRA2O43464 458 aaPredicted RBP17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 PYGLP06737 847 aa17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 FURINP09958 794 aa17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 DPTQ07507 201 aa17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 MIIPQ5JXC2 388 aa17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 TMCO4Q5TGY1 634 aa17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 ADAMTSL4Q6UY14 1074 aa17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 USP45Q70EL2 814 aa17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 NDUFAF2Q8N183 169 aa17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 BBS5Q8N3I7 341 aa17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 FNIP1Q8TF40 1166 aa17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 SPOCK2Q92563 424 aa17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 RNF31Q96EP0 1072 aa17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 MCEEQ96PE7 176 aa17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 HERPUD2Q9BSE4 406 aa17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 CNPY3Q9BT09 278 aa17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 DHX35Q9H5Z1 703 aaKnown RBP17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 SEPT11Q9NVA2 429 aaKnown RBP17.68■□□□□ 0.42
TSPAN3-204ENST00000558394 TTC24A2A3L6 582 aaPredicted RBP17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 NPIPB15A6NHN6 443 aaPredicted RBP17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 EIF3CLB5ME19 914 aaKnown RBP17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 SNX2O60749 519 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 CREG1O75629 220 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 KIAA0754O94854 1291 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 NDUFA10O95299 355 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 UNGP13051 313 aaPredicted RBP17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 ZNF28P17035 718 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 CHRNB2P17787 502 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 LHCGRP22888 699 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 HSPA9P38646 679 aaKnown RBP17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 PGDP52209 483 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 HSP90AA4PQ58FG1 418 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 ZNF787Q6DD87 383 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 DCUN1D2Q6PH85 259 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 CHST15Q7LFX5 561 aaPredicted RBP17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 MAMDC2Q7Z304 686 aaPredicted RBP17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 TMEM135Q86UB9 458 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 TRIM74Q86UV6 250 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 APLFQ8IW19 511 aaPredicted RBP17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 MLKLQ8NB16 471 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 AVL9Q8NBF6 648 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 SEC14L1Q92503 715 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 EIF3CQ99613 913 aaKnown RBP17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 SLC29A3Q9BZD2 475 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 VPS16Q9H269 839 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 IGSF5Q9NSI5 407 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 GPATCH2LQ9NWQ4 482 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 MAP10Q9P2G4 905 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 LNPEPQ9UIQ6 1025 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 AP4E1Q9UPM8 1137 aa17.67■□□□□ 0.42
TSPAN3-204ENST00000558394 ITPR2Q14571 2701 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 A6NCN8 305 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 EML2O95834 649 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 MT-ND3P03897 115 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 PDGFAP04085 211 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 ANKRD34CP0C6C1 535 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 PTP4A2Q12974 167 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 SEMA5AQ13591 1074 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 IL11RAQ14626 422 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 IYDQ6PHW0 289 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 ARHGAP36Q6ZRI8 547 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 TSPAN33Q86UF1 283 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 PHF13Q86YI8 300 aaPredicted RBP17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 CBARPQ8N350 705 aaPredicted RBP17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 SCRN2Q96FV2 425 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 ZNF599Q96NL3 588 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 OR6C1Q96RD1 312 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 SLC25A23Q9BV35 468 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 ABCG8Q9H221 673 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 SIDT1Q9NXL6 827 aaKnown RBP17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 PADI1Q9ULC6 663 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 MAP4K5Q9Y4K4 846 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 MED13Q9UHV7 2174 aa17.66■□□□□ 0.42
TSPAN3-204ENST00000558394 KIR2DS5A0A0G2JLQ3 304 aa17.65■□□□□ 0.42
TSPAN3-204ENST00000558394 A0A0G2JNG1 304 aa17.65■□□□□ 0.42
TSPAN3-204ENST00000558394 OR5K4A6NMS3 321 aa17.65■□□□□ 0.42
TSPAN3-204ENST00000558394 KIR2DS3K7RE56 304 aa17.65■□□□□ 0.42
TSPAN3-204ENST00000558394 DNAJB5O75953 348 aa17.65■□□□□ 0.42
TSPAN3-204ENST00000558394 RECKO95980 971 aa17.65■□□□□ 0.42
TSPAN3-204ENST00000558394 ERCC2P18074 760 aa17.65■□□□□ 0.42
TSPAN3-204ENST00000558394 SOX5P35711 763 aa17.65■□□□□ 0.42
TSPAN3-204ENST00000558394 GARSP41250 739 aaKnown RBP17.65■□□□□ 0.42
TSPAN3-204ENST00000558394 SLC10A7Q0GE19 358 aa17.65■□□□□ 0.42
TSPAN3-204ENST00000558394 DNASE1L3Q13609 305 aa17.65■□□□□ 0.42
TSPAN3-204ENST00000558394 KIR2DS5Q14953 304 aa17.65■□□□□ 0.42
TSPAN3-204ENST00000558394 ARMC12Q5T9G4 340 aa17.65■□□□□ 0.42
TSPAN3-204ENST00000558394 CYB5D1Q6P9G0 228 aa17.65■□□□□ 0.42
TSPAN3-204ENST00000558394 TECPR1Q7Z6L1 1165 aa17.65■□□□□ 0.42
TSPAN3-204ENST00000558394 ARHGAP12Q8IWW6 846 aa17.65■□□□□ 0.42
TSPAN3-204ENST00000558394 EXD1Q8NHP7 514 aa17.65■□□□□ 0.42
TSPAN3-204ENST00000558394 PRR7Q8TB68 274 aa17.65■□□□□ 0.42
TSPAN3-204ENST00000558394 ELMO2Q96JJ3 720 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms