RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 C12orf29Q8N999 325 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 OR6J1Q8NGC5 347 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 CDC26Q8NHZ8 85 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 FAM45AQ8TCE6 357 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 ADAMTS16Q8TE57 1224 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 ARNTL2Q8WYA1 636 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 RNF34Q969K3 372 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 NCLNQ969V3 563 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 RELTQ969Z4 430 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 ZUFSPQ96AP4 578 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 VPS33AQ96AX1 596 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 SH3KBP1Q96B97 665 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 DCUN1D1Q96GG9 259 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 CPB2Q96IY4 423 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 PLEKHA8Q96JA3 519 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 LGMNQ99538 433 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 TBL1YQ9BQ87 522 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 EBF4Q9BQW3 602 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 C17orf80Q9BSJ5 609 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 COLEC11Q9BWP8 271 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 FSD1LQ9BXM9 530 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 FTHL17Q9BXU8 183 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 ADAM33Q9BZ11 813 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 GRIP2Q9C0E4 1043 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 PITHD1Q9GZP4 211 aaPredicted RBP5.5□□□□□ -1.53
GABPB1-207ENST00000558335 RNF38Q9H0F5 515 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 RBM38Q9H0Z9 239 aaKnown RBP5.5□□□□□ -1.53
GABPB1-207ENST00000558335 RNPEPQ9H4A4 650 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 SLA2Q9H6Q3 261 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 RMND5AQ9H871 391 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 SPAG4Q9NPE6 437 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 CD320Q9NPF0 282 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 ATP13A2Q9NQ11 1180 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 ZC4H2Q9NQZ6 224 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 PNPLA3Q9NST1 481 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 FAM49BQ9NUQ9 324 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 PNPOQ9NVS9 261 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 PAQR5Q9NXK6 330 aaPredicted RBP5.5□□□□□ -1.53
GABPB1-207ENST00000558335 TMEM216Q9P0N5 145 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 TJP2Q9UDY2 1190 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 TEKT2Q9UIF3 430 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 MOSPD1Q9UJG1 213 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 SLC39A10Q9ULF5 831 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 PPM1HQ9ULR3 514 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 MAGED2Q9UNF1 606 aaPredicted RBP5.5□□□□□ -1.53
GABPB1-207ENST00000558335 RUVBL2Q9Y230 463 aaKnown RBP5.5□□□□□ -1.53
GABPB1-207ENST00000558335 TDRKHQ9Y2W6 561 aaKnown RBP5.5□□□□□ -1.53
GABPB1-207ENST00000558335 NDUFAF1Q9Y375 327 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 BOLA1Q9Y3E2 137 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 ZNF175Q9Y473 711 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 AP4S1Q9Y587 144 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 WASF2Q9Y6W5 498 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 TSC2P49815 1807 aa5.5□□□□□ -1.53
GABPB1-207ENST00000558335 OTOFQ9HC10 1997 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 A0A087WXM4 84 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 SMIM28A0A1B0GU29 152 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 ZCWPW2A0A1B0GU75 182 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 MBLAC1A4D2B0 266 aaPredicted RBP5.49□□□□□ -1.53
GABPB1-207ENST00000558335 AQP12BA6NM10 295 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 PRSS44E7EML9 344 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 E2F3O00716 465 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 GABRDO14764 452 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 AIM2O14862 343 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 UBDO15205 165 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 MATN3O15232 486 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 CLOCKO15516 846 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 SLC7A4O43246 635 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 ITM2AO43736 263 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 NUAK1O60285 661 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 PSIP1O75475 530 aaKnown RBP5.49□□□□□ -1.53
GABPB1-207ENST00000558335 CRTAPO75718 401 aaPredicted RBP5.49□□□□□ -1.53
GABPB1-207ENST00000558335 CNMDO75829 334 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 SRP72O76094 671 aaKnown RBP5.49□□□□□ -1.53
GABPB1-207ENST00000558335 RECQL4O94761 1208 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 ARIH2O95376 493 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 PIGNO95427 931 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 VTNP04004 478 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 GPIP06744 558 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 MMP3P08254 477 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 SNRPB2P08579 225 aaKnown RBP5.49□□□□□ -1.53
GABPB1-207ENST00000558335 LTA4HP09960 611 aaKnown RBP5.49□□□□□ -1.53
GABPB1-207ENST00000558335 ERVK-10P10266 1014 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 ODC1P11926 461 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 RAC2P15153 192 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 YBX3P16989 372 aaKnown RBP eCLIP5.49□□□□□ -1.531e-6■□□□□ 11.3
GABPB1-207ENST00000558335 ITGB6P18564 788 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 SLC7A1P30825 629 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 CCR1P32246 355 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 CCR3P51677 355 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 AP1S2P56377 157 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 HSD17B7P56937 341 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 DAOAP59103 153 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 LILRA4P59901 499 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 GPR85P60893 370 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 ADAM17P78536 824 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 NFKB2Q00653 900 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 RHDQ02161 417 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 EN1Q05925 392 aaPredicted RBP5.49□□□□□ -1.53
GABPB1-207ENST00000558335 LGALS3BPQ08380 585 aa5.49□□□□□ -1.53
GABPB1-207ENST00000558335 EPS8Q12929 822 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms