RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 PATE1Q8WXA2 126 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 FAF2Q96CS3 445 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 NUDT22Q9BRQ3 303 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 RIOK2Q9BVS4 552 aaKnown RBP14.56□□□□□ -0.08
SHMT2-235ENST00000557740 SEMA6CQ9H3T2 930 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 PCDH9Q9HC56 1237 aa14.56□□□□□ -0.08
SHMT2-235ENST00000557740 C1orf232A0A0U1RR37 186 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 LRRD1A4D1F6 860 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 INPP4BO15327 924 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 CBFA2T2O43439 604 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 B4GAT1O43505 415 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 CLDN7O95471 211 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 ASMTLO95671 621 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 TPM1P09493 284 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 GPR3P46089 330 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 PPM1FP49593 454 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-235ENST00000557740 NIPAL4Q0D2K0 466 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 NR1D2Q14995 579 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 PYCR3Q53H96 274 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 TMEM164Q5U3C3 297 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 USP53Q70EK8 1073 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 ZNF605Q86T29 641 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 NLRP8Q86W28 1048 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 NAGSQ8N159 534 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 EXD1Q8NHP7 514 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 ARRDC2Q8TBH0 407 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-235ENST00000557740 LRRN4Q8WUT4 740 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 TTC9Q92623 222 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 HDAC11Q96DB2 347 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 SCARF2Q96GP6 870 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-235ENST00000557740 DNAJC7Q99615 494 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 DTLQ9NZJ0 730 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 CFAP46Q8IYW2 2715 aa14.55□□□□□ -0.08
SHMT2-235ENST00000557740 UNC13CQ8NB66 2214 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 SSU72P8A0A1W2PR75 194 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 KCNK1O00180 336 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 HGSO14964 777 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-235ENST00000557740 AKR1B10O60218 316 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 PRLP01236 227 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 TMEM253P0C7T8 217 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 KDELR1P24390 212 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 ETV5P41161 510 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 CD86P42081 329 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 LY6DQ14210 128 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 IHHQ14623 411 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 MESDQ14696 234 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 C16orf72Q14CZ0 275 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 TGIF1Q15583 401 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 RAVER1Q8IY67 606 aaKnown RBP14.54□□□□□ -0.08
SHMT2-235ENST00000557740 RCBTB1Q8NDN9 531 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 OR8K1Q8NGG5 319 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 CCHCR1Q8TD31 782 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 RAPGEF5Q92565 580 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 USP7Q93009 1102 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 CCDC74BQ96LY2 380 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 RNF157Q96PX1 679 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 LYSMD1Q96S90 227 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 AGAP2Q99490 1192 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 ANP32EQ9BTT0 268 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 ADGRE3Q9BY15 652 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 KCNK4Q9NYG8 393 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 PKD2L2Q9NZM6 624 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 FOXJ2Q9P0K8 574 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 VPS18Q9P253 973 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 PLEKHM1Q9Y4G2 1056 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 PCDHB11Q9Y5F2 797 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 HEY1Q9Y5J3 304 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 ST14Q9Y5Y6 855 aa14.54□□□□□ -0.08
SHMT2-235ENST00000557740 IGHV5-10-1A0A0J9YXX1 117 aa14.53□□□□□ -0.08
SHMT2-235ENST00000557740 JCHAINP01591 159 aa14.53□□□□□ -0.08
SHMT2-235ENST00000557740 KRT1P04264 644 aa14.53□□□□□ -0.08
SHMT2-235ENST00000557740 CD82P27701 267 aa14.53□□□□□ -0.08
SHMT2-235ENST00000557740 CD1CP29017 333 aa14.53□□□□□ -0.08
SHMT2-235ENST00000557740 PPIDQ08752 370 aaKnown RBP14.53□□□□□ -0.08
SHMT2-235ENST00000557740 SLC10A2Q12908 348 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-235ENST00000557740 ODF2Q5BJF6 829 aa14.53□□□□□ -0.08
SHMT2-235ENST00000557740 MANEAQ5SRI9 462 aa14.53□□□□□ -0.08
SHMT2-235ENST00000557740 NKAIN2Q5VXU1 208 aa14.53□□□□□ -0.08
SHMT2-235ENST00000557740 ZFAND4Q86XD8 727 aa14.53□□□□□ -0.08
SHMT2-235ENST00000557740 CCDC112Q8NEF3 446 aa14.53□□□□□ -0.08
SHMT2-235ENST00000557740 COX14Q96I36 57 aa14.53□□□□□ -0.08
SHMT2-235ENST00000557740 DPYSL5Q9BPU6 564 aa14.53□□□□□ -0.08
SHMT2-235ENST00000557740 MLPHQ9BV36 600 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-235ENST00000557740 FAM83DQ9H4H8 585 aa14.53□□□□□ -0.08
SHMT2-235ENST00000557740 STN1Q9H668 368 aaKnown RBP14.53□□□□□ -0.08
SHMT2-235ENST00000557740 ZNHIT2Q9UHR6 403 aa14.53□□□□□ -0.08
SHMT2-235ENST00000557740 ARHGEF17Q96PE2 2063 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-235ENST00000557740 IGHV1OR21-1A0A087WYE8 117 aa14.52□□□□□ -0.09
SHMT2-235ENST00000557740 ZNF487B1APH4 448 aa14.52□□□□□ -0.09
SHMT2-235ENST00000557740 APOL1O14791 398 aa14.52□□□□□ -0.09
SHMT2-235ENST00000557740 PPM1DO15297 605 aa14.52□□□□□ -0.09
SHMT2-235ENST00000557740 ATP1A1P05023 1023 aaKnown RBP14.52□□□□□ -0.09
SHMT2-235ENST00000557740 PLA2G2AP14555 144 aa14.52□□□□□ -0.09
SHMT2-235ENST00000557740 SPINT3P49223 89 aa14.52□□□□□ -0.09
SHMT2-235ENST00000557740 IFI35P80217 286 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-235ENST00000557740 AP1B1Q10567 949 aa14.52□□□□□ -0.09
SHMT2-235ENST00000557740 ZBTB17Q13105 803 aa14.52□□□□□ -0.09
SHMT2-235ENST00000557740 TRA2AQ13595 282 aaKnown RBP eCLIP14.52□□□□□ -0.09
SHMT2-235ENST00000557740 QPCTQ16769 361 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms