RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 I6L893 689 aaPredicted RBP1.73□□□□□ -2.13
HIF1A-212ENST00000557538 SH2B2O14492 632 aaPredicted RBP1.73□□□□□ -2.13
HIF1A-212ENST00000557538 RPN1P04843 607 aaKnown RBP1.73□□□□□ -2.13
HIF1A-212ENST00000557538 TPM2P07951 284 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 SRPRAP08240 638 aaKnown RBP1.73□□□□□ -2.13
HIF1A-212ENST00000557538 SPARCP09486 303 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 ZNF853P0CG23 659 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 CTAGE8P0CG41 777 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 CDK4P11802 303 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 PMS2P54278 862 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 BPIFB3P59826 476 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 TRAF1Q13077 416 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 KLF9Q13886 244 aaPredicted RBP1.73□□□□□ -2.13
HIF1A-212ENST00000557538 PTGR1Q14914 329 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 C2orf68Q2NKX9 166 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 AMZ1Q400G9 498 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 LRCH2Q5VUJ6 765 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 GARNL3Q5VVW2 1013 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 TTI2Q6NXR4 508 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 BRAT1Q6PJG6 821 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 SHC4Q6S5L8 630 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 CHST9Q7L1S5 443 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 CTAGE4Q8IX94 777 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 SLC35F3Q8IY50 421 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 KIAA2013Q8IYS2 634 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 PRPF31Q8WWY3 499 aaKnown RBP1.73□□□□□ -2.13
HIF1A-212ENST00000557538 SLC22A18Q96BI1 424 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 EGLN2Q96KS0 407 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 CFAP57Q96MR6 1250 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 ZNF570Q96NI8 536 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 MPHOSPH8Q99549 860 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 BARD1Q99728 777 aaKnown RBP1.73□□□□□ -2.13
HIF1A-212ENST00000557538 SYT17Q9BSW7 474 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 SCNM1Q9BWG6 230 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 OSGEPL1Q9H4B0 414 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 RANGRFQ9HD47 186 aaPredicted RBP1.73□□□□□ -2.13
HIF1A-212ENST00000557538 CD93Q9NPY3 652 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 EPS15L1Q9UBC2 864 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 FBXL17Q9UF56 701 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 CNOT8Q9UFF9 292 aaKnown RBP1.73□□□□□ -2.13
HIF1A-212ENST00000557538 BARX2Q9UMQ3 279 aaPredicted RBP1.73□□□□□ -2.13
HIF1A-212ENST00000557538 ERVK-11Q9UQG0 969 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 TMEM5Q9Y2B1 443 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 SMARCA2P51531 1590 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 KANK1Q14678 1352 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 DHX29Q7Z478 1369 aaKnown RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 TMEM272A0A1B0GTI8 110 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 LNP1A1A4G5 178 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 TYW5A2RUC4 315 aaKnown RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 CASQ1P31415 396 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 RFC1P35251 1148 aaPredicted RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 NNMTP40261 264 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 PRCPP42785 496 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 KCNJ4P48050 445 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 ABATP80404 500 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 ACSM2AQ08AH3 577 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 GOLGA8DPQ0D2H9 430 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 CTTNQ14247 550 aaKnown RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 OASLQ15646 514 aaKnown RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 EFNB3Q15768 340 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 PRAMEF19Q5SWL8 479 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 ACSM2BQ68CK6 577 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 TRNP1Q6NT89 227 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 RPUSD3Q6P087 351 aaKnown RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 FAM198BQ6UWH4 519 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 Q75L30 129 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 IRF2BP2Q7Z5L9 587 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 MINDY1Q8N5J2 469 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 PARP16Q8N5Y8 322 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 ARL6IP6Q8N6S5 226 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 SYT2Q8N9I0 419 aaPredicted RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 ZNF114Q8NC26 417 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 C7orf57Q8NEG2 295 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 OR10S1Q8NGN2 331 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 DNAAF4Q8WXU2 420 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 PABPC5Q96DU9 382 aaKnown RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 ZNF48Q96MX3 618 aaPredicted RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 TTYH1Q9H313 450 aaPredicted RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 EBF2Q9HAK2 575 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 KLHL1Q9NR64 748 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 ANAPC2Q9UJX6 822 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 TMCC3Q9ULS5 477 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 NOSIPQ9Y314 301 aaKnown RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 RAP2CQ9Y3L5 183 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 A0A087WV48 116 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 LOC102723996A0A087X1L8 192 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 RFPL2O75678 378 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 SFTPCP11686 197 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 GLULP15104 373 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 NR2F2P24468 414 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 HADHAP40939 763 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 GPR143P51810 404 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 KRT83P78385 493 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 BECN1Q14457 450 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 MVPQ14764 893 aaKnown RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 NR1D2Q14995 579 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 SYT16Q17RD7 645 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 DNAJC21Q5F1R6 531 aaKnown RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 DCST1Q5T197 706 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 NAA16Q6N069 864 aaPredicted RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms