RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 CSPG4P5Q96PW8 444 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 MCCC1Q96RQ3 725 aaPredicted RBP14□□□□□ -0.17
SLIRP-210ENST00000557431 SLC38A3Q99624 504 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 ARFGAP3Q9NP61 516 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 STAU2Q9NUL3 570 aaKnown RBP eCLIP14□□□□□ -0.17
SLIRP-210ENST00000557431 PILRAQ9UKJ1 303 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 KCNK6Q9Y257 313 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 ICE1Q9Y2F5 2266 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 UBR5O95071 2799 aaPredicted RBP14□□□□□ -0.17
SLIRP-210ENST00000557431 EIF3CLB5ME19 914 aaKnown RBP13.99□□□□□ -0.17
SLIRP-210ENST00000557431 PSMD11O00231 422 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 RARAP10276 462 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 ARL4AP40617 200 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 CCR10P46092 362 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 HCAR3P49019 387 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 DSC2Q02487 901 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 PTSQ03393 145 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 ZNF648Q5T619 568 aaPredicted RBP13.99□□□□□ -0.17
SLIRP-210ENST00000557431 DCAF12Q5T6F0 453 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 C16orf46Q6P387 395 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 CLEC17AQ6ZS10 378 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 RBM43Q6ZSC3 357 aaKnown RBP13.99□□□□□ -0.17
SLIRP-210ENST00000557431 USP45Q70EL2 814 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 CHST15Q7LFX5 561 aaPredicted RBP13.99□□□□□ -0.17
SLIRP-210ENST00000557431 CPNE8Q86YQ8 564 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 GALNT13Q8IUC8 556 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 LZTR1Q8N653 840 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 CCDC112Q8NEF3 446 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 NCSTNQ92542 709 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 SCARF2Q96GP6 870 aaPredicted RBP13.99□□□□□ -0.17
SLIRP-210ENST00000557431 EIF3CQ99613 913 aaKnown RBP13.99□□□□□ -0.17
SLIRP-210ENST00000557431 RIOK2Q9BVS4 552 aaKnown RBP13.99□□□□□ -0.17
SLIRP-210ENST00000557431 DDA1Q9BW61 102 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 TBC1D10AQ9BXI6 508 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 B3GNT4Q9C0J1 378 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 ADNPQ9H2P0 1102 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 GPN2Q9H9Y4 310 aaPredicted RBP13.99□□□□□ -0.17
SLIRP-210ENST00000557431 PCDH18Q9HCL0 1135 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 ANKMY1Q9P2S6 941 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 CHKBQ9Y259 395 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 TTLL3Q9Y4R7 772 aa13.99□□□□□ -0.17
SLIRP-210ENST00000557431 SPENQ96T58 3664 aaKnown RBP13.99□□□□□ -0.17
SLIRP-210ENST00000557431 ZNF891A8MT65 544 aaPredicted RBP13.98□□□□□ -0.17
SLIRP-210ENST00000557431 MFSD11O43934 449 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 SNX2O60749 519 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 DNAJC6O75061 913 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 CLDN7O95471 211 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 CD48P09326 243 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 ACP5P13686 325 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 GJC1P36383 396 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 HSPA9P38646 679 aaKnown RBP13.98□□□□□ -0.17
SLIRP-210ENST00000557431 HHEXQ03014 270 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 DPTQ07507 201 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 CDC20Q12834 499 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 DPYSL2Q16555 572 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 DEFB109BQ30KR1 87 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.98□□□□□ -0.17
SLIRP-210ENST00000557431 MARC1Q5VT66 337 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 ADAMTSL4Q6UY14 1074 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 SFRP1Q8N474 314 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 SPOCK2Q92563 424 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 WDR24Q96S15 920 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 TBC1D29Q9UFV1 150 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 ZNHIT2Q9UHR6 403 aa13.98□□□□□ -0.17
SLIRP-210ENST00000557431 NBPF19A0A087WUL8 3843 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 A0A0J9YYE9 177 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 A0A1W2PQ67 120 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 FADS2P1A8MWK0 482 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 B4E171 279 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 K7EM74 188 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 ZW10O43264 779 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 FZD6O60353 706 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 TRBC1P01850 177 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 ZNF28P17035 718 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 F8A1P23610 371 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 TEAD1P28347 426 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 TSPAN7P41732 249 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 FASLGP48023 281 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 GFERP55789 205 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 GPLD1P80108 840 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 STX1AQ16623 288 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 CLPPQ16740 277 aaPredicted RBP13.97□□□□□ -0.17
SLIRP-210ENST00000557431 SASS6Q6UVJ0 657 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 ARHGAP22Q7Z5H3 698 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 NLGN4XQ8N0W4 816 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 BBS5Q8N3I7 341 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 NLGN4YQ8NFZ3 816 aaPredicted RBP13.97□□□□□ -0.17
SLIRP-210ENST00000557431 OR10G6Q8NH81 332 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 C9orf43Q8TAL5 461 aaPredicted RBP13.97□□□□□ -0.17
SLIRP-210ENST00000557431 NSMCE1Q8WV22 266 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 COX14Q96I36 57 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 SLC45A3Q96JT2 553 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 SPRY4Q9C004 299 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 ANO10Q9NW15 660 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 PPIL1Q9Y3C6 166 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 SHANK1Q9Y566 2161 aa13.97□□□□□ -0.17
SLIRP-210ENST00000557431 STK17BO94768 372 aa13.96□□□□□ -0.17
SLIRP-210ENST00000557431 CCDC172P0C7W6 258 aa13.96□□□□□ -0.17
SLIRP-210ENST00000557431 STC1P52823 247 aa13.96□□□□□ -0.17
SLIRP-210ENST00000557431 EPHB1P54762 984 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms