RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 STAG3L1P0CL83 205 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 SMIM10L2AP0DMW4 78 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 SMIM10L2BP0DMW5 78 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 T-ENOLP0DO92 83 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 HOXB8P17481 243 aaPredicted RBP4.04□□□□□ -1.76
CHD8-212ENST00000557329 MTHFRP42898 656 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 TDO2P48775 406 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 AARSP49588 968 aaKnown RBP eCLIP4.04□□□□□ -1.76
CHD8-212ENST00000557329 ENTPD1P49961 510 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 CYP2J2P51589 502 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 ROR2Q01974 943 aaKnown RBP4.04□□□□□ -1.76
CHD8-212ENST00000557329 RHAGQ02094 409 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 GALNT1Q10472 559 aaPredicted RBP4.04□□□□□ -1.76
CHD8-212ENST00000557329 NONOQ15233 471 aaKnown RBP eCLIP4.04□□□□□ -1.76
CHD8-212ENST00000557329 SMAD1Q15797 465 aaKnown RBP4.04□□□□□ -1.76
CHD8-212ENST00000557329 STXBP2Q15833 593 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 ADCK5Q3MIX3 580 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 N4BP2L1Q5TBK1 243 aaPredicted RBP4.04□□□□□ -1.76
CHD8-212ENST00000557329 FAM171A1Q5VUB5 890 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 ARHGEF16Q5VV41 709 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 CTR9Q6PD62 1173 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 TSSK4Q6SA08 328 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 GALNT7Q86SF2 657 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 STT3BQ8TCJ2 826 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 IGFBPL1Q8WX77 278 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 THAP4Q8WY91 577 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 SUSD6Q92537 303 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 FRAT1Q92837 279 aaPredicted RBP4.04□□□□□ -1.76
CHD8-212ENST00000557329 CASP10Q92851 521 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 P2RX5Q93086 422 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 TRIM63Q969Q1 353 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 MCRS1Q96EZ8 462 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 THOC3Q96J01 351 aaKnown RBP4.04□□□□□ -1.76
CHD8-212ENST00000557329 SPATA33Q96N06 139 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 NECTIN4Q96NY8 510 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 CTAGE1Q96RT6 745 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 CDCA3Q99618 268 aaPredicted RBP4.04□□□□□ -1.76
CHD8-212ENST00000557329 NTPCRQ9BSD7 190 aaKnown RBP4.04□□□□□ -1.76
CHD8-212ENST00000557329 MECRQ9BV79 373 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 IFT27Q9BW83 186 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 CADM1Q9BY67 442 aaKnown RBP4.04□□□□□ -1.76
CHD8-212ENST00000557329 TRIM31Q9BZY9 425 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 RBM38Q9H0Z9 239 aaKnown RBP4.04□□□□□ -1.76
CHD8-212ENST00000557329 S1PR5Q9H228 398 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.04□□□□□ -1.76
CHD8-212ENST00000557329 DBNLQ9UJU6 430 aaKnown RBP4.04□□□□□ -1.76
CHD8-212ENST00000557329 GINS2Q9Y248 185 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 ASPMQ8IZT6 3477 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 RALGAPA2Q2PPJ7 1873 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 FOCADQ5VW36 1801 aa4.04□□□□□ -1.76
CHD8-212ENST00000557329 GVINP1Q7Z2Y8 2422 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 NAV1Q8NEY1 1877 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 RPS10-NUDT3A0A1W2PQS6 291 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 FSD2A1L4K1 749 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 TSPY2A6NKD2 308 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 IRAK2O43187 625 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 DHX16O60231 1041 aaKnown RBP4.03□□□□□ -1.76
CHD8-212ENST00000557329 CXCL14O95715 111 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 ICAM1P05362 532 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 CD52P31358 61 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 PNPLA4P41247 253 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 GRK6P43250 576 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 RPS6P62753 249 aaKnown RBP4.03□□□□□ -1.76
CHD8-212ENST00000557329 TFAP4Q01664 338 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 CDK18Q07002 472 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 ARHGAP1Q07960 439 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 DSC1Q08554 894 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 EFR3AQ14156 821 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 PTPN14Q15678 1187 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 CCDC184Q52MB2 194 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 OTUD1Q5VV17 481 aaPredicted RBP4.03□□□□□ -1.76
CHD8-212ENST00000557329 TMEM268Q5VZI3 342 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 DCLRE1AQ6PJP8 1040 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 C19orf48Q6RUI8 117 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 RTL10Q7L3V2 364 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 SERINC5Q86VE9 423 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 TMC8Q8IU68 726 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 RPAP2Q8IXW5 612 aaPredicted RBP4.03□□□□□ -1.76
CHD8-212ENST00000557329 SUMF1Q8NBK3 374 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 NOC3LQ8WTT2 800 aaKnown RBP4.03□□□□□ -1.76
CHD8-212ENST00000557329 ARRDC3Q96B67 414 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 SLC39A13Q96H72 371 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 TEFMQ96QE5 360 aaKnown RBP4.03□□□□□ -1.76
CHD8-212ENST00000557329 API5Q9BZZ5 524 aaKnown RBP4.03□□□□□ -1.76
CHD8-212ENST00000557329 FAM49AQ9H0Q0 323 aaPredicted RBP4.03□□□□□ -1.76
CHD8-212ENST00000557329 BOLA2Q9H3K6 86 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 PRKRIP1Q9H875 184 aaPredicted RBP4.03□□□□□ -1.76
CHD8-212ENST00000557329 IL1RAPL2Q9NP60 686 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 KRCC1Q9NPI7 259 aaPredicted RBP4.03□□□□□ -1.76
CHD8-212ENST00000557329 G6PC2Q9NQR9 355 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 SLC22A11Q9NSA0 550 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 KIF17Q9P2E2 1029 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 TBC1D14Q9P2M4 693 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 TAGLN3Q9UI15 199 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 MYH7BA7E2Y1 1941 aa4.03□□□□□ -1.76
CHD8-212ENST00000557329 PARP14Q460N5 1801 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 DENND3A2RUS2 1198 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 EME2A4GXA9 379 aaPredicted RBP4.02□□□□□ -1.77
CHD8-212ENST00000557329 HMX3A6NHT5 357 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 H0Y3Z8 333 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms