RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 CIB4A0PJX0 185 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 E7ENX8 843 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 SRPRAP08240 638 aaKnown RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 CTPS1P17812 591 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 IGFBP5P24593 272 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 RPA3P35244 121 aaPredicted RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 ST3GAL4Q11206 333 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 SNAPC2Q13487 334 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 SNAPC1Q16533 368 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 ACTL9Q8TC94 416 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 C12orf43Q96C57 262 aaKnown RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 TMEM121Q9BTD3 319 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 TMEM27Q9HBJ8 222 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 GPATCH2Q9NW75 528 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 UGT2B10P36537 528 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 PTAR1Q7Z6K3 402 aaPredicted RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 LYARQ9NX58 379 aaKnown RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 MDFIC2A0A1B0GVS7 189 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 SCAF4O95104 1147 aaKnown RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 THEGLP0DJG4 465 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 TOB2Q14106 344 aaPredicted RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 UBXN11Q5T124 520 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 DSELQ8IZU8 1212 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 SLC39A1Q9NY26 324 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 BARX2Q9UMQ3 279 aaPredicted RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 ABHD14A-ACY1A0A1B0GW23 586 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 ADH6P28332 368 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 MMP13P45452 471 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 CRISP1P54107 249 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 MARSP56192 900 aaKnown RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 IRF8Q02556 426 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 SYT16Q17RD7 645 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 TRIM74Q86UV6 250 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 TRIM73Q86UV7 250 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 CENPSQ8N2Z9 138 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 DQX1Q8TE96 717 aaKnown RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 NAT14Q8WUY8 206 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 TCF7L1Q9HCS4 588 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 POFUT2Q9Y2G5 429 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 C2CD2LO14523 706 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 KCNJ1P48048 391 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 PFKFB4Q16877 469 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 AARDQ4LEZ3 155 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 ZNF433Q8N7K0 673 aaPredicted RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 CLP1Q92989 425 aaKnown RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 GFM1Q96RP9 751 aaKnown RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 MRPL9Q9BYD2 267 aaKnown RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 TREM1Q9NP99 234 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 SPTA1P02549 2419 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 F5H6K3 240 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 M0R233 179 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 SLC22A3O75751 556 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 THP07101 528 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 CYP3A4P08684 503 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 MBL2P11226 248 aaPredicted RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 GNAZP19086 355 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 RPL26P61254 145 aaKnown RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 KLRC3Q07444 240 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 GNMTQ14749 295 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 MTF1Q14872 753 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 SHC4Q6S5L8 630 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 OR4C15Q8NGM1 316 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 OR2T34Q8NGX1 318 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 OR2T3Q8NH03 318 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 PRAMEF12O95522 483 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 ANGPTL1O95841 491 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 PAEPP09466 180 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 LCN1P31025 176 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 MVKQ03426 396 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 PTPN21Q16825 1174 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 NOL9Q5SY16 702 aaKnown RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 CPTPQ5TA50 214 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 FAAH2Q6GMR7 532 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 UBR7Q8N806 425 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 DCP1AQ9NPI6 582 aaPredicted RBP8.81□□□□□ -1
SYNE3-205ENST00000557275 NDOR1Q9UHB4 597 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 UBQLN2Q9UHD9 624 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 FADS3Q9Y5Q0 445 aa8.81□□□□□ -1
SYNE3-205ENST00000557275 I3L521 148 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 IFNW1P05000 195 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 NUDT7P0C024 238 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 AMPD1P23109 780 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 CAMK1GQ96NX5 476 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 NODALQ96S42 347 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 SLC39A3Q9BRY0 314 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 KIAA1683Q9H0B3 1180 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 DENND2DQ9H6A0 471 aaPredicted RBP8.8□□□□□ -1
SYNE3-205ENST00000557275 COPS7AQ9UBW8 275 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 PON1P27169 355 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 ZNF700Q9H0M5 742 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 SMURF1Q9HCE7 757 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 AXIN2Q9Y2T1 843 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 INTS1Q8N201 2190 aaKnown RBP8.8□□□□□ -1
SYNE3-205ENST00000557275 FABP12A6NFH5 140 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 CBX4O00257 560 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 EIF1AYO14602 144 aaKnown RBP8.8□□□□□ -1
SYNE3-205ENST00000557275 ERBB2P04626 1255 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 PRDX6P30041 224 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 EIF1AXP47813 144 aaKnown RBP8.8□□□□□ -1
SYNE3-205ENST00000557275 MAPK12P53778 367 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms