RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 TGIF1Q15583 401 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 HSP90AA4PQ58FG1 418 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 CDKAL1Q5VV42 579 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 SPECC1LQ69YQ0 1117 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 DNAJC24Q6P3W2 148 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 PHLDB2Q86SQ0 1253 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 ZSWIM9Q86XI8 627 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 CAMK1DQ8IU85 385 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 PSTKQ8IV42 348 aaKnown RBP8.67□□□□□ -1.02
VRK1-206ENST00000557222 CBARPQ8N350 705 aaPredicted RBP8.67□□□□□ -1.02
VRK1-206ENST00000557222 LZTR1Q8N653 840 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 Q8N9G6 341 aaPredicted RBP8.67□□□□□ -1.02
VRK1-206ENST00000557222 USP7Q93009 1102 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 PDXPQ96GD0 296 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 ZNF599Q96NL3 588 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 GSDMCQ9BYG8 508 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 TMEM168Q9H0V1 697 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 CDH19Q9H159 772 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 DPEP2Q9H4A9 486 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 WDR26Q9H7D7 661 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 FGF22Q9HCT0 170 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 FAM207AQ9NSI2 230 aaPredicted RBP8.67□□□□□ -1.02
VRK1-206ENST00000557222 GEMIN8Q9NWZ8 242 aaKnown RBP8.67□□□□□ -1.02
VRK1-206ENST00000557222 TRNAU1APQ9NX07 287 aaKnown RBP8.67□□□□□ -1.02
VRK1-206ENST00000557222 TMEM63CQ9P1W3 806 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 SIK3Q9Y2K2 1263 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 RNF215Q9Y6U7 377 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 PRSS38A1L453 326 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 LRRC10BA6NIK2 292 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 STMND1H3BQB6 276 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 PSMD11O00231 422 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 B4GAT1O43505 415 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 SOCS5O75159 536 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 PPFIA2O75334 1257 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 MYCLP1P12525 358 aaPredicted RBP8.66□□□□□ -1.02
VRK1-206ENST00000557222 HGFP14210 728 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 CCNB1P14635 433 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 MPSTP25325 297 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 HSPA9P38646 679 aaKnown RBP8.66□□□□□ -1.02
VRK1-206ENST00000557222 ETV5P41161 510 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 HCAR3P49019 387 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 PAPOLAP51003 745 aaKnown RBP8.66□□□□□ -1.02
VRK1-206ENST00000557222 IL10RBQ08334 325 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 ILF3Q12906 894 aaKnown RBP eCLIP8.66□□□□□ -1.02
VRK1-206ENST00000557222 KRT31Q15323 416 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 TBR1Q16650 682 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 RALGPS1Q5JS13 557 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 ERMARDQ5T6L9 678 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 ACAD10Q6JQN1 1059 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 DCUN1D2Q6PH85 259 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 ZNF574Q6ZN55 896 aaPredicted RBP8.66□□□□□ -1.02
VRK1-206ENST00000557222 PLA2G15Q8NCC3 412 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 CCDC112Q8NEF3 446 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 NEK11Q8NG66 645 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 WFDC12Q8WWY7 111 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 EXTL1Q92935 676 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 EXOC2Q96KP1 924 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 COQ10AQ96MF6 247 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 PSKH2Q96QS6 385 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 TAAR9Q96RI9 348 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 AGPAT1Q99943 283 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 SSBP4Q9BWG4 385 aaPredicted RBP8.66□□□□□ -1.02
VRK1-206ENST00000557222 TEX101Q9BY14 249 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 SLC39A8Q9C0K1 460 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 SLC25A18Q9H1K4 315 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 VPS16Q9H269 839 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 CYP4F12Q9HCS2 524 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 NLRC4Q9NPP4 1024 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 PHPT1Q9NRX4 125 aaPredicted RBP8.66□□□□□ -1.02
VRK1-206ENST00000557222 TAB2Q9NYJ8 693 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 TUBD1Q9UJT1 453 aa8.66□□□□□ -1.02
VRK1-206ENST00000557222 RP1L1Q8IWN7 2480 aaPredicted RBP8.66□□□□□ -1.02
VRK1-206ENST00000557222 USP9YO00507 2555 aaPredicted RBP8.65□□□□□ -1.02
VRK1-206ENST00000557222 FAM170AA1A519 330 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 RHPN2P1A8MT19 583 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 B4DGG1 531 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 EEF2KO00418 725 aaKnown RBP8.65□□□□□ -1.02
VRK1-206ENST00000557222 EPHB6O15197 1021 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 HTRA2O43464 458 aaPredicted RBP8.65□□□□□ -1.02
VRK1-206ENST00000557222 FGF1P05230 155 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 RPLP1P05386 114 aaKnown RBP8.65□□□□□ -1.02
VRK1-206ENST00000557222 CEACAM5P06731 702 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 IVLP07476 585 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 ATP1A3P13637 1013 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 GM2AP17900 193 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 ITIH1P19827 911 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 NOS3P29474 1203 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 EIF1AXP47813 144 aaKnown RBP8.65□□□□□ -1.02
VRK1-206ENST00000557222 LIMK2P53671 638 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 MAPK10P53779 464 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 RPL7AP62424 266 aaKnown RBP8.65□□□□□ -1.02
VRK1-206ENST00000557222 DPTQ07507 201 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 MAP9Q49MG5 647 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 PHF19Q5T6S3 580 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 KCTD16Q68DU8 428 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 TMPRSS9Q7Z410 1059 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 ZFAND4Q86XD8 727 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 NRROSQ86YC3 692 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 ARHGAP12Q8IWW6 846 aa8.65□□□□□ -1.02
VRK1-206ENST00000557222 RAVER1Q8IY67 606 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms