RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 OLFM3Q96PB7 478 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 PPP1R2P1Q96PQ5 205 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 QKIQ96PU8 341 aaKnown RBP eCLIP4.54□□□□□ -1.68
SRP54-212ENST00000556992 CYTH2Q99418 400 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 VAT1Q99536 393 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 TKTL2Q9H0I9 626 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 C10orf88Q9H8K7 445 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 XAB2Q9HCS7 855 aaKnown RBP4.54□□□□□ -1.68
SRP54-212ENST00000556992 WDR6Q9NNW5 1121 aaKnown RBP4.54□□□□□ -1.68
SRP54-212ENST00000556992 OLA1Q9NTK5 396 aaKnown RBP4.54□□□□□ -1.68
SRP54-212ENST00000556992 ETNK2Q9NVF9 386 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 ARHGEF38Q9NXL2 777 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 CLIC5Q9NZA1 410 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 IL37Q9NZH6 218 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 COX16Q9P0S2 106 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 SENP1Q9P0U3 644 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 FNIP2Q9P278 1114 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 DNAJB4Q9UDY4 337 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 STK39Q9UEW8 545 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 MAFFQ9ULX9 164 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 PRG3Q9Y2Y8 225 aaPredicted RBP4.54□□□□□ -1.68
SRP54-212ENST00000556992 IKBKGQ9Y6K9 419 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 CEP290O15078 2479 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 LRRC37A2A6NM11 1700 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 LCTP09848 1927 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 PTPRFP10586 1907 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 FAM92AA1XBS5 289 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 SMIM23A6NLE4 172 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 TBKBP1A7MCY6 615 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 ERI2A8K979 691 aaKnown RBP4.53□□□□□ -1.68
SRP54-212ENST00000556992 KCNU1A8MYU2 1149 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 F8W810 466 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 FAM72CH0Y354 149 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 GOLGA8MH3BSY2 632 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 RNF103O00237 685 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 EBAG9O00559 213 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 NDUFAB1O14561 156 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 KIAA0355O15063 1070 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 DCLK1O15075 740 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 TBC1D4O60343 1298 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 EFCAB14O75071 495 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 IGLV3-25P01717 112 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 APRTP07741 180 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 VSIG10L2P0DP72 767 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 HAPLN1P10915 354 aaPredicted RBP4.53□□□□□ -1.68
SRP54-212ENST00000556992 ERCC2P18074 760 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 TPSB2P20231 275 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 CCNCP24863 283 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 EPHB2P29323 1055 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 STX2P32856 288 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 ELK3P41970 407 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 SLC11A1P49279 550 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 TUBP50607 506 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 SLC5A3P53794 718 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 CCL23P55773 120 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 SESN2P58004 480 aaPredicted RBP4.53□□□□□ -1.68
SRP54-212ENST00000556992 PITX1P78337 314 aaPredicted RBP4.53□□□□□ -1.68
SRP54-212ENST00000556992 AP1B1Q10567 949 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 SEMA3BQ13214 749 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 EIF4EBP2Q13542 120 aaPredicted RBP4.53□□□□□ -1.68
SRP54-212ENST00000556992 SEMA5AQ13591 1074 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 PRPSAP1Q14558 356 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 KCNJ11Q14654 390 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 TPSAB1Q15661 275 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 PKN2Q16513 984 aaKnown RBP4.53□□□□□ -1.68
SRP54-212ENST00000556992 USP41Q3LFD5 358 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 TMEM177Q53S58 311 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 ANKRD20A2Q5SQ80 823 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 LY6G5CQ5SRR4 150 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 FNBP1LQ5T0N5 605 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 FAM72AQ5TYM5 149 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 ANKRD20A1Q5TYW2 823 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 ANKRD20A3Q5VUR7 823 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 OTUD1Q5VV17 481 aaPredicted RBP4.53□□□□□ -1.68
SRP54-212ENST00000556992 PRAMEF9Q5VWM5 478 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 ANKRD22Q5VYY1 191 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 NCBP2-AS2Q69YL0 99 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 ITPRIPL1Q6GPH6 555 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 FAM72DQ6L9T8 149 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 KIAA1841Q6NSI8 718 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 RWDD4Q6NW29 188 aaKnown RBP4.53□□□□□ -1.68
SRP54-212ENST00000556992 LRRC31Q6UY01 552 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 MICALCLQ6ZW33 695 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 BHLHA9Q7RTU4 235 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 PID1Q7Z2X4 250 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 CPLX4Q7Z7G2 160 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 SCD5Q86SK9 330 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 EXOC3L1Q86VI1 746 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 FAM72BQ86X60 149 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 CCDC13Q8IYE1 715 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 LRRC43Q8N309 656 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 COLGALT1Q8NBJ5 622 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 FBXO36Q8NEA4 188 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 MDGA1Q8NFP4 955 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 CCDC110Q8TBZ0 833 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 BCAS4Q8TDM0 211 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 DQX1Q8TE96 717 aaKnown RBP4.53□□□□□ -1.68
SRP54-212ENST00000556992 MAML1Q92585 1016 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 P2RY11Q96G91 374 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 SERPINB11Q96P15 392 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms