RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 IP6K3Q96PC2 410 aa5.72□□□□□ -1.49
ATXN3-245ENST00000556958 OR6C1Q96RD1 312 aa5.72□□□□□ -1.49
ATXN3-245ENST00000556958 PSMB7Q99436 277 aa5.72□□□□□ -1.49
ATXN3-245ENST00000556958 PRMT1Q99873 361 aaKnown RBP5.72□□□□□ -1.49
ATXN3-245ENST00000556958 WRAP53Q9BUR4 548 aaKnown RBP5.72□□□□□ -1.49
ATXN3-245ENST00000556958 FGFBP2Q9BYJ0 223 aa5.72□□□□□ -1.49
ATXN3-245ENST00000556958 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-245ENST00000556958 ZSCAN16Q9H4T2 348 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-245ENST00000556958 CARS2Q9HA77 564 aaKnown RBP5.72□□□□□ -1.49
ATXN3-245ENST00000556958 BRD7Q9NPI1 651 aa5.72□□□□□ -1.49
ATXN3-245ENST00000556958 FGF21Q9NSA1 209 aa5.72□□□□□ -1.49
ATXN3-245ENST00000556958 SIDT1Q9NXL6 827 aaKnown RBP5.72□□□□□ -1.49
ATXN3-245ENST00000556958 KLHL3Q9UH77 587 aa5.72□□□□□ -1.49
ATXN3-245ENST00000556958 TSPAN16Q9UKR8 245 aa5.72□□□□□ -1.49
ATXN3-245ENST00000556958 KIAA1257Q9ULG3 409 aa5.72□□□□□ -1.49
ATXN3-245ENST00000556958 DCHS2Q6V1P9 2916 aa5.72□□□□□ -1.49
ATXN3-245ENST00000556958 DIDO1Q9BTC0 2240 aaKnown RBP5.72□□□□□ -1.49
ATXN3-245ENST00000556958 FBN1P35555 2871 aaKnown RBP5.72□□□□□ -1.49
ATXN3-245ENST00000556958 TCHHQ07283 1943 aa5.72□□□□□ -1.49
ATXN3-245ENST00000556958 UNC13CQ8NB66 2214 aa5.71□□□□□ -1.49
ATXN3-245ENST00000556958 ABCA4P78363 2273 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 A0A0U1RQS6 177 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 CXorf51AA0A1B0GTR3 108 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 FOXO6A8MYZ6 492 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 PAX4O43316 350 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 FZD6O60353 706 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 ZNF821O75541 412 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-245ENST00000556958 ADCY5O95622 1261 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 UGT2B4P06133 528 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 HEXAP06865 529 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 KLK3P07288 261 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-245ENST00000556958 INHBBP09529 407 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 ESRRAP11474 423 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-245ENST00000556958 EPB42P16452 691 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 ERCC5P28715 1186 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-245ENST00000556958 TRIM23P36406 574 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 FASLGP48023 281 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 SERPINH1P50454 418 aaKnown RBP5.71□□□□□ -1.5
ATXN3-245ENST00000556958 RAD23BP54727 409 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 RPS18P62269 152 aaKnown RBP5.71□□□□□ -1.5
ATXN3-245ENST00000556958 SNRPD1P62314 119 aaKnown RBP5.71□□□□□ -1.5
ATXN3-245ENST00000556958 CSNK1G2P78368 415 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 OTUD4Q01804 1114 aaKnown RBP5.71□□□□□ -1.5
ATXN3-245ENST00000556958 CDC16Q13042 620 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 IL10RAQ13651 578 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 AUHQ13825 339 aaKnown RBP5.71□□□□□ -1.5
ATXN3-245ENST00000556958 MYBPC3Q14896 1274 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 PCOLCEQ15113 449 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 MYLK3Q32MK0 819 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 C8orf34Q49A92 452 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 B3GNTL1Q67FW5 361 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-245ENST00000556958 KCTD16Q68DU8 428 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 ERAP2Q6P179 960 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 SLC30A9Q6PML9 568 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 FAM180AQ6UWF9 173 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 GDPD4Q6W3E5 623 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 MEX3BQ6ZN04 569 aaKnown RBP5.71□□□□□ -1.5
ATXN3-245ENST00000556958 TAC4Q86UU9 113 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 NRROSQ86YC3 692 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 GUF1Q8N442 669 aaKnown RBP5.71□□□□□ -1.5
ATXN3-245ENST00000556958 CLEC1AQ8NC01 280 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 UBA3Q8TBC4 463 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 PLEKHO2Q8TD55 490 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 FUBP1Q96AE4 644 aaKnown RBP5.71□□□□□ -1.5
ATXN3-245ENST00000556958 ELMO2Q96JJ3 720 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 HSFY1Q96LI6 401 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 KLHL32Q96NJ5 620 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 SLX1AQ9BQ83 275 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 WDR77Q9BQA1 342 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-245ENST00000556958 SPON2Q9BUD6 331 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 ENKD1Q9H0I2 346 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 WDR26Q9H7D7 661 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 APOBEC3GQ9HC16 384 aaKnown RBP5.71□□□□□ -1.5
ATXN3-245ENST00000556958 CISHQ9NSE2 258 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 CCM2LQ9NUG4 571 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-245ENST00000556958 OLAHQ9NV23 265 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 TNFRSF10DQ9UBN6 386 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 DMGDHQ9UI17 866 aaKnown RBP5.71□□□□□ -1.5
ATXN3-245ENST00000556958 DCTN4Q9UJW0 460 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 VANGL2Q9ULK5 521 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 SNX7Q9UNH6 387 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 HS3ST4Q9Y661 456 aa5.71□□□□□ -1.5
ATXN3-245ENST00000556958 MAP1AP78559 2803 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-245ENST00000556958 CFAP69A5D8W1 941 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 DRGXA6NNA5 263 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 RNF212BA8MTL3 300 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 C19orf84I3L1E1 186 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 CREB3O43889 395 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 TRUB2O95900 331 aaKnown RBP5.7□□□□□ -1.5
ATXN3-245ENST00000556958 RAB40ALP0C0E4 278 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 VDRP11473 427 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 CD19P15391 556 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 GJB2P29033 226 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 HOXD13P35453 343 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 ACTR1BP42025 376 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 RGS7P49802 495 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 GEMIN4P57678 1058 aaKnown RBP5.7□□□□□ -1.5
ATXN3-245ENST00000556958 ACTR1AP61163 376 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 IRX6P78412 446 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-245ENST00000556958 PPP2R2BQ00005 443 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms