RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 SNX2O60749 519 aa14.69□□□□□ -0.06
CHD8-211ENST00000556833 CD48P09326 243 aa14.69□□□□□ -0.06
CHD8-211ENST00000556833 HSPA9P38646 679 aaKnown RBP14.69□□□□□ -0.06
CHD8-211ENST00000556833 GPR3P46089 330 aa14.69□□□□□ -0.06
CHD8-211ENST00000556833 POLE2P56282 527 aa14.69□□□□□ -0.06
CHD8-211ENST00000556833 TYRO3Q06418 890 aa14.69□□□□□ -0.06
CHD8-211ENST00000556833 IHHQ14623 411 aa14.69□□□□□ -0.06
CHD8-211ENST00000556833 ANO6Q4KMQ2 910 aa14.69□□□□□ -0.06
CHD8-211ENST00000556833 PYCR3Q53H96 274 aa14.69□□□□□ -0.06
CHD8-211ENST00000556833 BORAQ6PGQ7 559 aa14.69□□□□□ -0.06
CHD8-211ENST00000556833 CHST15Q7LFX5 561 aaPredicted RBP14.69□□□□□ -0.06
CHD8-211ENST00000556833 PSTKQ8IV42 348 aaKnown RBP14.69□□□□□ -0.06
CHD8-211ENST00000556833 CCDC112Q8NEF3 446 aa14.69□□□□□ -0.06
CHD8-211ENST00000556833 LPCAT1Q8NF37 534 aa14.69□□□□□ -0.06
CHD8-211ENST00000556833 MCCC1Q96RQ3 725 aaPredicted RBP14.69□□□□□ -0.06
CHD8-211ENST00000556833 APMAPQ9HDC9 416 aa14.69□□□□□ -0.06
CHD8-211ENST00000556833 ARFGAP3Q9NP61 516 aa14.69□□□□□ -0.06
CHD8-211ENST00000556833 ZNF71Q9NQZ8 489 aaPredicted RBP14.69□□□□□ -0.06
CHD8-211ENST00000556833 OAS3Q9Y6K5 1087 aaKnown RBP14.69□□□□□ -0.06
CHD8-211ENST00000556833 ZNF106Q9H2Y7 1883 aaKnown RBP14.69□□□□□ -0.06
CHD8-211ENST00000556833 LRRC10BA6NIK2 292 aa14.68□□□□□ -0.06
CHD8-211ENST00000556833 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.68□□□□□ -0.06
CHD8-211ENST00000556833 PSMD11O00231 422 aa14.68□□□□□ -0.06
CHD8-211ENST00000556833 NKX2-8O15522 239 aa14.68□□□□□ -0.06
CHD8-211ENST00000556833 ZW10O43264 779 aa14.68□□□□□ -0.06
CHD8-211ENST00000556833 ACP5P13686 325 aa14.68□□□□□ -0.06
CHD8-211ENST00000556833 NFKBIAP25963 317 aa14.68□□□□□ -0.06
CHD8-211ENST00000556833 CDH6P55285 790 aa14.68□□□□□ -0.06
CHD8-211ENST00000556833 PTSQ03393 145 aa14.68□□□□□ -0.06
CHD8-211ENST00000556833 KCNAB2Q13303 367 aa14.68□□□□□ -0.06
CHD8-211ENST00000556833 TDRD12Q587J7 1177 aaKnown RBP14.68□□□□□ -0.06
CHD8-211ENST00000556833 ZNF648Q5T619 568 aaPredicted RBP14.68□□□□□ -0.06
CHD8-211ENST00000556833 ATP1A1-AS1Q5TC04 95 aa14.68□□□□□ -0.06
CHD8-211ENST00000556833 PPP1R2P3Q6NXS1 205 aa14.68□□□□□ -0.06
CHD8-211ENST00000556833 ADAMTSL4Q6UY14 1074 aa14.68□□□□□ -0.06
CHD8-211ENST00000556833 CBARPQ8N350 705 aaPredicted RBP14.68□□□□□ -0.06
CHD8-211ENST00000556833 NCSTNQ92542 709 aa14.68□□□□□ -0.06
CHD8-211ENST00000556833 RTN4Q9NQC3 1192 aaKnown RBP14.68□□□□□ -0.06
CHD8-211ENST00000556833 GEMIN8Q9NWZ8 242 aaKnown RBP14.68□□□□□ -0.06
CHD8-211ENST00000556833 A0A1W2PQ67 120 aa14.67□□□□□ -0.06
CHD8-211ENST00000556833 CLDN7O95471 211 aa14.67□□□□□ -0.06
CHD8-211ENST00000556833 SLC4A1P02730 911 aa14.67□□□□□ -0.06
CHD8-211ENST00000556833 PCK1P35558 622 aa14.67□□□□□ -0.06
CHD8-211ENST00000556833 SLC25A11Q02978 314 aaKnown RBP14.67□□□□□ -0.06
CHD8-211ENST00000556833 HHEXQ03014 270 aa14.67□□□□□ -0.06
CHD8-211ENST00000556833 TRA2AQ13595 282 aaKnown RBP eCLIP14.67□□□□□ -0.06
CHD8-211ENST00000556833 PLA2G4EQ3MJ16 856 aa14.67□□□□□ -0.06
CHD8-211ENST00000556833 DCAF12Q5T6F0 453 aa14.67□□□□□ -0.06
CHD8-211ENST00000556833 TMEM71Q6P5X7 295 aa14.67□□□□□ -0.06
CHD8-211ENST00000556833 OR10G6Q8NH81 332 aa14.67□□□□□ -0.06
CHD8-211ENST00000556833 THAP2Q9H0W7 228 aa14.67□□□□□ -0.06
CHD8-211ENST00000556833 EPN3Q9H201 632 aa14.67□□□□□ -0.06
CHD8-211ENST00000556833 GPN2Q9H9Y4 310 aaPredicted RBP14.67□□□□□ -0.06
CHD8-211ENST00000556833 MRPL47Q9HD33 250 aaKnown RBP14.67□□□□□ -0.06
CHD8-211ENST00000556833 TBC1D29Q9UFV1 150 aa14.67□□□□□ -0.06
CHD8-211ENST00000556833 ANAPC7Q9UJX3 599 aa14.67□□□□□ -0.06
CHD8-211ENST00000556833 MYO6Q9UM54 1294 aa14.67□□□□□ -0.06
CHD8-211ENST00000556833 A0A0J9YYE9 177 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 LOC101059948A0A1B0GTJ6 334 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 TRBC1P01850 177 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 SFTPCP11686 197 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 GZMAP12544 262 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 SERPINB6P35237 376 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 ZNF135P52742 658 aaPredicted RBP14.66□□□□□ -0.06
CHD8-211ENST00000556833 STC1P52823 247 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 DPTQ07507 201 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 IGFBP7Q16270 282 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 ATP13A4Q4VNC1 1196 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 BOLA3Q53S33 107 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 C16orf46Q6P387 395 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 XKR5Q6UX68 686 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 KDELC2Q7Z4H8 507 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 SFRP1Q8N474 314 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 BMPERQ8N8U9 685 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 ZNF564Q8TBZ8 553 aaPredicted RBP14.66□□□□□ -0.06
CHD8-211ENST00000556833 SPOCK2Q92563 424 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 RTP4Q96DX8 246 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 TRIM11Q96F44 468 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 SCARF2Q96GP6 870 aaPredicted RBP14.66□□□□□ -0.06
CHD8-211ENST00000556833 NAP1L5Q96NT1 182 aaPredicted RBP14.66□□□□□ -0.06
CHD8-211ENST00000556833 NUP85Q9BW27 656 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 DDA1Q9BW61 102 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 TBC1D10AQ9BXI6 508 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 POLR1EQ9GZS1 481 aaKnown RBP14.66□□□□□ -0.06
CHD8-211ENST00000556833 KCTD5Q9NXV2 234 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 AIPL1Q9NZN9 384 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 PCDHGA3Q9Y5H0 932 aa14.66□□□□□ -0.06
CHD8-211ENST00000556833 MRPS18BQ9Y676 258 aaKnown RBP14.66□□□□□ -0.06
CHD8-211ENST00000556833 C1orf232A0A0U1RR37 186 aa14.65□□□□□ -0.06
CHD8-211ENST00000556833 ZNF891A8MT65 544 aaPredicted RBP14.65□□□□□ -0.06
CHD8-211ENST00000556833 FADS2P1A8MWK0 482 aa14.65□□□□□ -0.06
CHD8-211ENST00000556833 FZD6O60353 706 aa14.65□□□□□ -0.06
CHD8-211ENST00000556833 DNAJC6O75061 913 aa14.65□□□□□ -0.06
CHD8-211ENST00000556833 HLA-DQB2P05538 268 aa14.65□□□□□ -0.06
CHD8-211ENST00000556833 MYBL1P10243 752 aa14.65□□□□□ -0.06
CHD8-211ENST00000556833 TEAD1P28347 426 aa14.65□□□□□ -0.06
CHD8-211ENST00000556833 GARSP41250 739 aaKnown RBP14.65□□□□□ -0.06
CHD8-211ENST00000556833 CCR10P46092 362 aa14.65□□□□□ -0.06
CHD8-211ENST00000556833 GPLD1P80108 840 aa14.65□□□□□ -0.06
CHD8-211ENST00000556833 NIPAL4Q0D2K0 466 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms