RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 PPP2CBP62714 309 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 PPP2CAP67775 309 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 PRAMEP78395 509 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 CRADDP78560 199 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 CACNG1Q06432 222 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 DMWDQ09019 674 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 PEX6Q13608 980 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 LRRC14Q15048 493 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 PTPRRQ15256 657 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 TYSND1Q2T9J0 566 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 WSCD2Q2TBF2 565 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 AARS2Q5JTZ9 985 aaKnown RBP11.21□□□□□ -0.61
FOXN3-212ENST00000556541 PEAR1Q5VY43 1037 aaPredicted RBP11.21□□□□□ -0.61
FOXN3-212ENST00000556541 SEL1L3Q68CR1 1132 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 KYAT3Q6YP21 454 aaKnown RBP11.21□□□□□ -0.61
FOXN3-212ENST00000556541 LPCAT2Q7L5N7 544 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 ABI3BPQ7Z7G0 1075 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 FAM124AQ86V42 546 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 DCP2Q8IU60 420 aaKnown RBP11.21□□□□□ -0.61
FOXN3-212ENST00000556541 PALM2Q8IXS6 379 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 OR4L1Q8NH43 312 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.21□□□□□ -0.61
FOXN3-212ENST00000556541 ZNF669Q96BR6 464 aaPredicted RBP11.21□□□□□ -0.61
FOXN3-212ENST00000556541 BIRC7Q96CA5 298 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 AP2M1Q96CW1 435 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 ERLEC1Q96DZ1 483 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 CERS2Q96G23 380 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 LOXL4Q96JB6 756 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 PKNOX2Q96KN3 472 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 TBATAQ96M53 351 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 ZNF778Q96MU6 729 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 FCRL3Q96P31 734 aaPredicted RBP11.21□□□□□ -0.61
FOXN3-212ENST00000556541 HINFPQ9BQA5 517 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 FAM167BQ9BTA0 163 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 GPR174Q9BXC1 333 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 C6orf106Q9H6K1 298 aaPredicted RBP11.21□□□□□ -0.61
FOXN3-212ENST00000556541 LRRC4CQ9HCJ2 640 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 GPR27Q9NS67 375 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 NSMCE4AQ9NXX6 385 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 NINJ2Q9NZG7 142 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 VPS9D1Q9Y2B5 631 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 KCTD3Q9Y597 815 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 ABCA7Q8IZY2 2146 aa11.21□□□□□ -0.62
FOXN3-212ENST00000556541 IGLV3-16A0A075B6K0 115 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 CCDC162PA2VCL2 907 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 FAM159BA6NKW6 160 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 BANF1O75531 89 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 RHOBTB1O94844 696 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 PRAMEF1O95521 474 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 SOD1P00441 154 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 C1QAP02745 245 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 FAM153BP0C7A2 387 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 PXNP49023 591 aaPredicted RBP11.2□□□□□ -0.62
FOXN3-212ENST00000556541 ARSDP51689 593 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 KIAA1024LP59773 190 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 GPX6P59796 221 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 RPL6Q02878 288 aaKnown RBP11.2□□□□□ -0.62
FOXN3-212ENST00000556541 MGAT5Q09328 741 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 NFATC2Q13469 925 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 ITIH4Q14624 930 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 RASA2Q15283 850 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 FAM153CQ494X1 144 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 WDR45BQ5MNZ6 344 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 RNF187Q5TA31 235 aaPredicted RBP11.2□□□□□ -0.62
FOXN3-212ENST00000556541 MRNIPQ6NTE8 343 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 PNCKQ6P2M8 343 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 ZC3H14Q6PJT7 736 aaKnown RBP11.2□□□□□ -0.62
FOXN3-212ENST00000556541 TSSK4Q6SA08 328 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 PACS1Q6VY07 963 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 C3orf62Q6ZUJ4 267 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 SLC26A11Q86WA9 606 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 CCDC25Q86WR0 208 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 DDHD1Q8NEL9 900 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 C1orf216Q8TAB5 229 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 ZNF398Q8TD17 642 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 RLN3Q8WXF3 142 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 HDAC10Q969S8 669 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 COX14Q96I36 57 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 TTC1Q99614 292 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 TEX101Q9BY14 249 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 ACSS3Q9H6R3 686 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 INTS10Q9NVR2 710 aaKnown RBP11.2□□□□□ -0.62
FOXN3-212ENST00000556541 SLC2A6Q9UGQ3 507 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 FKBPLQ9UIM3 349 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 SLC30A1Q9Y6M5 507 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 PIKFYVEQ9Y2I7 2098 aa11.2□□□□□ -0.62
FOXN3-212ENST00000556541 TP53BP1Q12888 1972 aaPredicted RBP11.19□□□□□ -0.62
FOXN3-212ENST00000556541 LRP4O75096 1905 aa11.19□□□□□ -0.62
FOXN3-212ENST00000556541 A0A087WUV0 522 aaPredicted RBP11.19□□□□□ -0.62
FOXN3-212ENST00000556541 TCRBV9S1A1TA0A576 114 aa11.19□□□□□ -0.62
FOXN3-212ENST00000556541 A8MX80 341 aa11.19□□□□□ -0.62
FOXN3-212ENST00000556541 PRR5-ARHGAP8B1AHC4 643 aa11.19□□□□□ -0.62
FOXN3-212ENST00000556541 FPGTO14772 594 aa11.19□□□□□ -0.62
FOXN3-212ENST00000556541 PFDN6O15212 129 aa11.19□□□□□ -0.62
FOXN3-212ENST00000556541 RIPK2O43353 540 aa11.19□□□□□ -0.62
FOXN3-212ENST00000556541 MAGEC1O60732 1142 aa11.19□□□□□ -0.62
FOXN3-212ENST00000556541 VAPBO95292 243 aa11.19□□□□□ -0.62
FOXN3-212ENST00000556541 PAK4O96013 591 aaPredicted RBP11.19□□□□□ -0.62
FOXN3-212ENST00000556541 GOT2P00505 430 aaKnown RBP11.19□□□□□ -0.62
FOXN3-212ENST00000556541 NUDT17P0C025 328 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms