RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 OR2M4Q96R27 311 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 WDR24Q96S15 920 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 RIOK2Q9BVS4 552 aaKnown RBP13.22□□□□□ -0.29
TGFB3-204ENST00000556285 CLMPQ9H6B4 373 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 CBX8Q9HC52 389 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 KCTD5Q9NXV2 234 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 PRKAB1Q9Y478 270 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 PCDHGA4Q9Y5G9 962 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 OAS3Q9Y6K5 1087 aaKnown RBP13.22□□□□□ -0.29
TGFB3-204ENST00000556285 RELNP78509 3460 aa13.22□□□□□ -0.29
TGFB3-204ENST00000556285 ZNF106Q9H2Y7 1883 aaKnown RBP13.21□□□□□ -0.29
TGFB3-204ENST00000556285 IGHV1OR21-1A0A087WYE8 117 aa13.21□□□□□ -0.29
TGFB3-204ENST00000556285 A0A1W2PQJ5 194 aa13.21□□□□□ -0.29
TGFB3-204ENST00000556285 CLDN7O95471 211 aa13.21□□□□□ -0.29
TGFB3-204ENST00000556285 SERPING1P05155 500 aa13.21□□□□□ -0.29
TGFB3-204ENST00000556285 HLA-DQB2P05538 268 aa13.21□□□□□ -0.29
TGFB3-204ENST00000556285 FAM87AP0C7U9 286 aa13.21□□□□□ -0.29
TGFB3-204ENST00000556285 STC1P52823 247 aa13.21□□□□□ -0.29
TGFB3-204ENST00000556285 LIMK2P53671 638 aa13.21□□□□□ -0.29
TGFB3-204ENST00000556285 SLC10A2Q12908 348 aaPredicted RBP13.21□□□□□ -0.29
TGFB3-204ENST00000556285 PAFAH1B3Q15102 231 aaKnown RBP13.21□□□□□ -0.29
TGFB3-204ENST00000556285 MANEAQ5SRI9 462 aa13.21□□□□□ -0.29
TGFB3-204ENST00000556285 PQLC3Q8N755 202 aa13.21□□□□□ -0.29
TGFB3-204ENST00000556285 SYN2Q92777 582 aaPredicted RBP13.21□□□□□ -0.29
TGFB3-204ENST00000556285 POLR1EQ9GZS1 481 aaKnown RBP13.21□□□□□ -0.29
TGFB3-204ENST00000556285 RBM22Q9NW64 420 aaKnown RBP eCLIP13.21□□□□□ -0.29
TGFB3-204ENST00000556285 RCOR3Q9P2K3 495 aaPredicted RBP13.21□□□□□ -0.29
TGFB3-204ENST00000556285 NENFQ9UMX5 172 aa13.21□□□□□ -0.29
TGFB3-204ENST00000556285 HECTD1Q9ULT8 2610 aa13.21□□□□□ -0.3
TGFB3-204ENST00000556285 UBR5O95071 2799 aaPredicted RBP13.2□□□□□ -0.3
TGFB3-204ENST00000556285 MYO1FO00160 1098 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 MATN3O15232 486 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 WISP1O95388 367 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 ATP1A1P05023 1023 aaKnown RBP13.2□□□□□ -0.3
TGFB3-204ENST00000556285 NFKBIAP25963 317 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 GPR3P46089 330 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 EPHB1P54762 984 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 ZBED6P86452 979 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 GBE1Q04446 702 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 BIRC2Q13490 618 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 CLCA4Q14CN2 919 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 ANKRD20A8PQ5CZ79 823 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 CCDC122Q5T0U0 273 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 ALG1LQ6GMV1 187 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 ALKBH5Q6P6C2 394 aaKnown RBP13.2□□□□□ -0.3
TGFB3-204ENST00000556285 LPCAT1Q8NF37 534 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 SLC37A2Q8TED4 501 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 COX14Q96I36 57 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 TDRD1Q9BXT4 1180 aaKnown RBP13.2□□□□□ -0.3
TGFB3-204ENST00000556285 PACSIN1Q9BY11 444 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 OCIAD1Q9NX40 245 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 CNOT6Q9ULM6 557 aaKnown RBP13.2□□□□□ -0.3
TGFB3-204ENST00000556285 CAPN11Q9UMQ6 739 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 TTLL3Q9Y4R7 772 aa13.2□□□□□ -0.3
TGFB3-204ENST00000556285 BZW2Q9Y6E2 419 aaKnown RBP13.2□□□□□ -0.3
TGFB3-204ENST00000556285 TLN1Q9Y490 2541 aaKnown RBP13.2□□□□□ -0.3
TGFB3-204ENST00000556285 SYCE3A1L190 88 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 FADS2P1A8MWK0 482 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 TERTO14746 1132 aaKnown RBP13.19□□□□□ -0.3
TGFB3-204ENST00000556285 DNAJC6O75061 913 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 ASMTLO95671 621 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 GYPCP04921 128 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 MMP2P08253 660 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 UBASH3AP57075 661 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 TBR1Q16650 682 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 ZNF765Q7L2R6 523 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 LRRC49Q8IUZ0 686 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 KCTD6Q8NC69 237 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 OR4D9Q8NGE8 314 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 ZNF564Q8TBZ8 553 aaPredicted RBP13.19□□□□□ -0.3
TGFB3-204ENST00000556285 ART4Q93070 314 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 NKD1Q969G9 470 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 TSGA13Q96PP4 275 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 TAAR9Q96RI9 348 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 CDH19Q9H159 772 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 STARD5Q9NSY2 213 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 KCNK4Q9NYG8 393 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 SEPT10Q9P0V9 454 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 B3GALT1Q9Y5Z6 326 aa13.19□□□□□ -0.3
TGFB3-204ENST00000556285 A8MU76 341 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.18□□□□□ -0.3
TGFB3-204ENST00000556285 HGSO14964 777 aaPredicted RBP13.18□□□□□ -0.3
TGFB3-204ENST00000556285 PROSCO94903 275 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 THRAP10827 490 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 ZNF30P17039 623 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 CCNCP24863 283 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 KCNC4Q03721 635 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 SQSTM1Q13501 440 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 IFI16Q16666 785 aaKnown RBP13.18□□□□□ -0.3
TGFB3-204ENST00000556285 QPCTQ16769 361 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 HADHQ16836 314 aaKnown RBP13.18□□□□□ -0.3
TGFB3-204ENST00000556285 ZNF648Q5T619 568 aaPredicted RBP13.18□□□□□ -0.3
TGFB3-204ENST00000556285 NLRP8Q86W28 1048 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 GALNT13Q8IUC8 556 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 NDUFAF2Q8N183 169 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 SFRP1Q8N474 314 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 EXD1Q8NHP7 514 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 RAPGEF5Q92565 580 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 FAF2Q96CS3 445 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 BRD8Q9H0E9 1235 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms