RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 ADAMTSL4Q6UY14 1074 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 Q6ZSR6 202 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 ZNF534Q76KX8 674 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 ABI3BPQ7Z7G0 1075 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 OXR1Q8N573 874 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 SUMF1Q8NBK3 374 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 TP53I13Q8NBR0 393 aaPredicted RBP7.6□□□□□ -1.19
TDP1-214ENST00000556063 GPR26Q8NDV2 337 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 ZNF398Q8TD17 642 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 HEXDCQ8WVB3 486 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 IFT81Q8WYA0 676 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 SEC14L1Q92503 715 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 RUBCNQ92622 972 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 ART4Q93070 314 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 SCAMP4Q969E2 229 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 ULK4Q96C45 1275 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 STAMBPL1Q96FJ0 436 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 CDKN2AIPNLQ96HQ2 116 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 DNAJC1Q96KC8 554 aaKnown RBP7.6□□□□□ -1.19
TDP1-214ENST00000556063 EBNA1BP2Q99848 306 aaKnown RBP7.6□□□□□ -1.19
TDP1-214ENST00000556063 HINFPQ9BQA5 517 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 RHOXF2Q9BQY4 288 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 ORAI3Q9BRQ5 295 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 KIFC1Q9BW19 673 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 NUSAP1Q9BXS6 441 aaKnown RBP7.6□□□□□ -1.19
TDP1-214ENST00000556063 ZDHHC5Q9C0B5 715 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 ZCCHC2Q9C0B9 1178 aaKnown RBP7.6□□□□□ -1.19
TDP1-214ENST00000556063 PHACTR1Q9C0D0 580 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 ARRDC1-AS1Q9H2J1 176 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 EBF2Q9HAK2 575 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 FZD3Q9NPG1 666 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 IL26Q9NPH9 171 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 GDF3Q9NR23 364 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 FAM86C1Q9NVL1 165 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 NLE1Q9NVX2 485 aaPredicted RBP7.6□□□□□ -1.19
TDP1-214ENST00000556063 SYBUQ9NX95 663 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 DMGDHQ9UI17 866 aaKnown RBP7.6□□□□□ -1.19
TDP1-214ENST00000556063 CD84Q9UIB8 345 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 SLC6A14Q9UN76 642 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 SOX13Q9UN79 622 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 FNDC3AQ9Y2H6 1198 aaKnown RBP7.6□□□□□ -1.19
TDP1-214ENST00000556063 PLXNA2O75051 1894 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 GOLGA4Q13439 2230 aaKnown RBP7.59□□□□□ -1.19
TDP1-214ENST00000556063 ATXN2Q99700 1313 aaKnown RBP7.59□□□□□ -1.19
TDP1-214ENST00000556063 ESYT3A0FGR9 886 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 POM121BA6NF01 834 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 CFAP99D6REC4 459 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 F8W8V4 182 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 AVILO75366 819 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 SRP72O76094 671 aaKnown RBP7.59□□□□□ -1.19
TDP1-214ENST00000556063 USP1O94782 785 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 SLC25A14O95258 325 aaPredicted RBP7.59□□□□□ -1.19
TDP1-214ENST00000556063 PRAMEF1O95521 474 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 TUBBP07437 444 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 RALBP11234 206 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 MYCLP1P12525 358 aaPredicted RBP7.59□□□□□ -1.19
TDP1-214ENST00000556063 GM2AP17900 193 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 PGAM1P18669 254 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 MCM3P25205 808 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 PSMA3P25788 255 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 MC4RP32245 332 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 TRIM23P36406 574 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 CSNK1EP49674 416 aaKnown RBP7.59□□□□□ -1.19
TDP1-214ENST00000556063 BLKP51451 505 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 ATXN3P54252 364 aaPredicted RBP7.59□□□□□ -1.19
TDP1-214ENST00000556063 CLDN2P57739 230 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 KIAA1024LP59773 190 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 PFN3P60673 137 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 CRADDP78560 199 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 CDK3Q00526 305 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 ACVR1Q04771 509 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 CACNG1Q06432 222 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 DHX9Q08211 1270 aaKnown RBP7.59□□□□□ -1.19
TDP1-214ENST00000556063 PDIA2Q13087 525 aaKnown RBP7.59□□□□□ -1.19
TDP1-214ENST00000556063 CBLBQ13191 982 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 CHRNA6Q15825 494 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 KCTD19Q17RG1 926 aaPredicted RBP7.59□□□□□ -1.19
TDP1-214ENST00000556063 TRIM61Q5EBN2 209 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 ZRANB3Q5FWF4 1079 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 AARS2Q5JTZ9 985 aaKnown RBP7.59□□□□□ -1.19
TDP1-214ENST00000556063 SPANXN3Q5MJ09 141 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 LDLRAP1Q5SW96 308 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 LYPLAL1Q5VWZ2 237 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 PEAR1Q5VY43 1037 aaPredicted RBP7.59□□□□□ -1.19
TDP1-214ENST00000556063 SLC23A3Q6PIS1 610 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 AFTPHQ6ULP2 937 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 FAM151BQ6UXP7 276 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 CERS6Q6ZMG9 384 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 GCNT7Q6ZNI0 430 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 RFLNAQ6ZTI6 216 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 SNX20Q7Z614 316 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 SDCCAG8Q86SQ7 713 aaPredicted RBP7.59□□□□□ -1.19
TDP1-214ENST00000556063 HEATR4Q86WZ0 1026 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 PHYKPLQ8IUZ5 450 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 EIF1ADQ8N9N8 165 aaKnown RBP7.59□□□□□ -1.19
TDP1-214ENST00000556063 OR13C4Q8NGS5 318 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 OR6P1Q8NGX9 317 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 C1orf216Q8TAB5 229 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 GDAP1Q8TB36 358 aa7.59□□□□□ -1.19
TDP1-214ENST00000556063 FBXO25Q8TCJ0 367 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms