RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 SLC26A11Q86WA9 606 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 CNTN4Q8IWV2 1026 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 TBC1D3Q8IZP1 549 aaPredicted RBP10.99□□□□□ -0.65
TMEM260-208ENST00000555905 GPR26Q8NDV2 337 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 GPR150Q8NGU9 434 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 OR2T34Q8NGX1 318 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 MRRFQ96E11 262 aaKnown RBP10.99□□□□□ -0.65
TMEM260-208ENST00000555905 NUS1Q96E22 293 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 DTD2Q96FN9 168 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 AGAP2Q99490 1192 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 TTC1Q99614 292 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 CPNE1Q99829 537 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 SPATA16Q9BXB7 569 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 C1QTNF7Q9BXJ2 289 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 IL26Q9NPH9 171 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 SPATA6Q9NWH7 488 aaPredicted RBP10.99□□□□□ -0.65
TMEM260-208ENST00000555905 ZNF446Q9NWS9 450 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 DLGAP2Q9P1A6 1054 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 NFKBIL1Q9UBC1 381 aaPredicted RBP10.99□□□□□ -0.65
TMEM260-208ENST00000555905 EBF1Q9UH73 591 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 SLC24A2Q9UI40 661 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 CD84Q9UIB8 345 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 NFS1Q9Y697 457 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 PLXNA2O75051 1894 aa10.99□□□□□ -0.65
TMEM260-208ENST00000555905 A0A1W2PQU0 124 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 OR51F1A6NGY5 319 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 FAM47DPA6NHR8 397 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 SMIM23A6NLE4 172 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 CXorf49A8MYA2 514 aaPredicted RBP10.98□□□□□ -0.65
TMEM260-208ENST00000555905 MAP2K7O14733 419 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 PI15O43692 258 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 RNGTTO60942 597 aaKnown RBP10.98□□□□□ -0.65
TMEM260-208ENST00000555905 PIAS1O75925 651 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 RECQL5O94762 991 aaPredicted RBP10.98□□□□□ -0.65
TMEM260-208ENST00000555905 SEMA4FO95754 770 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 C1QAP02745 245 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 OGNP20774 298 aaKnown RBP10.98□□□□□ -0.65
TMEM260-208ENST00000555905 TTPAP49638 278 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 XIAPP98170 497 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 CREB5Q02930 508 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 ZNF844Q08AG5 666 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 ILF2Q12905 390 aaKnown RBP10.98□□□□□ -0.65
TMEM260-208ENST00000555905 NFATC2Q13469 925 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 PEX6Q13608 980 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 CHRNA6Q15825 494 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 KRT71Q3SY84 523 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 GPR33Q49SQ1 333 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 SETMARQ53H47 684 aaPredicted RBP10.98□□□□□ -0.65
TMEM260-208ENST00000555905 CEP85LQ5SZL2 805 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 LYPLAL1Q5VWZ2 237 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 RFLNAQ6ZTI6 216 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 KIAA0408Q6ZU52 694 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 MARK2Q7KZI7 788 aaKnown RBP10.98□□□□□ -0.65
TMEM260-208ENST00000555905 TAOK1Q7L7X3 1001 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 TAS2R42Q7RTR8 314 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 SNX20Q7Z614 316 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 STRA8Q7Z7C7 330 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 HORMAD1Q86X24 394 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 CILP2Q8IUL8 1156 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 CNPY4Q8N129 248 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 ZNF398Q8TD17 642 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 DTX3LQ8TDB6 740 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 SLC44A1Q8WWI5 657 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 SCG3Q8WXD2 468 aaKnown RBP10.98□□□□□ -0.65
TMEM260-208ENST00000555905 ULK4Q96C45 1275 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 AP2M1Q96CW1 435 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 PAFAH2Q99487 392 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 ZSCAN5AQ9BUG6 496 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 TMEM109Q9BVC6 243 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 RIOK2Q9BVS4 552 aaKnown RBP10.98□□□□□ -0.65
TMEM260-208ENST00000555905 ABCG8Q9H221 673 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 ASB8Q9H765 288 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 SMYD2Q9NRG4 433 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 PSMC3IPQ9P2W1 217 aaPredicted RBP10.98□□□□□ -0.65
TMEM260-208ENST00000555905 CRLS1Q9UJA2 301 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 CYP8B1Q9UNU6 501 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 VPS9D1Q9Y2B5 631 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 COQ6Q9Y2Z9 468 aa10.98□□□□□ -0.65
TMEM260-208ENST00000555905 TRPM6Q9BX84 2022 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 BPTFQ12830 3046 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 TLDC2A0PJX2 215 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 OPA1O60313 960 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 CDH16O75309 829 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 NDUFS3O75489 264 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 PYGLP06737 847 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 MYZAPP0CAP1 466 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 GM2AP17900 193 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 CD6P30203 668 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 FOXN2P32314 431 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 ACSL1P33121 698 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 GP5P40197 560 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 SLC1A2P43004 574 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 SLCO1A2P46721 670 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 PXNP49023 591 aaPredicted RBP10.97□□□□□ -0.65
TMEM260-208ENST00000555905 SERPINB9P50453 376 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 DPTQ07507 201 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 CTBP1Q13363 440 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 MAP7D1Q3KQU3 841 aa10.97□□□□□ -0.65
TMEM260-208ENST00000555905 HENMT1Q5T8I9 393 aaKnown RBP10.97□□□□□ -0.65
TMEM260-208ENST00000555905 RNF187Q5TA31 235 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms