RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	PLK5	Q496M5	336 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	GPR33	Q49SQ1	333 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	FASTKD1	Q53R41	847 aa	Known RBP	12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	HENMT1	Q5T8I9	393 aa	Known RBP	12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	MRNIP	Q6NTE8	343 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	PNCK	Q6P2M8	343 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	EMB	Q6PCB8	327 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	UNC5A	Q6ZN44	842 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	CAPN12	Q6ZSI9	719 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	TRMT10C	Q7L0Y3	403 aa	Known RBP	12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	TAS2R42	Q7RTR8	314 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	NLRP8	Q86W28	1048 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	PHYKPL	Q8IUZ5	450 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	SLC41A1	Q8IVJ1	513 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	IGDCC3	Q8IVU1	814 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	AGGF1	Q8N302	714 aa	eCLIP	12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	TP53I13	Q8NBR0	393 aa	Predicted RBP	12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	OR4L1	Q8NH43	312 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	GDAP1	Q8TB36	358 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	DTX3L	Q8TDB6	740 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	CDKL2	Q92772	493 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	SKA1	Q96BD8	255 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	CENPT	Q96BT3	561 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	ULK4	Q96C45	1275 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	ZC3H10	Q96K80	434 aa	Known RBP	12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	C9orf72	Q96LT7	481 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	TBATA	Q96M53	351 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	FAM167B	Q9BTA0	163 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	ASB8	Q9H765	288 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	FZD3	Q9NPG1	666 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	CATSPERZ	Q9NTU4	200 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	SUSD2	Q9UGT4	822 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	EIF2B4	Q9UI10	523 aa	Known RBP	12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	CRLS1	Q9UJA2	301 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	FAM169A	Q9Y6X4	670 aa		12.45	□□□□□ -0.42
ABCD4-223	ENST00000555904	CCDC162P	A2VCL2	907 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	PRR5-ARHGAP8	B1AHC4	643 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	CACNB4	O00305	520 aa	Predicted RBP	12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	TOR1B	O14657	336 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	LILRB5	O75023	590 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	GOT2	P00505	430 aa	Known RBP	12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	FAM153B	P0C7A2	387 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	MYBL2	P10244	700 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	RALB	P11234	206 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	GM2A	P17900	193 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	KEL	P23276	732 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	PSMA3	P25788	255 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	HTR1B	P28222	390 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	PML	P29590	882 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	PTGER3	P43115	390 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	ARSD	P51689	593 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	THOP1	P52888	689 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	PMS2	P54278	862 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	RACK1	P63244	317 aa	Known RBP	12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	INPP5A	Q14642	412 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	CHRNA6	Q15825	494 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	FAM153C	Q494X1	144 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	LYPLAL1	Q5VWZ2	237 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	ADAMTSL4	Q6UY14	1074 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	RFLNA	Q6ZTI6	216 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	C3orf62	Q6ZUJ4	267 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	SNX20	Q7Z614	316 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	PTAR1	Q7Z6K3	402 aa	Predicted RBP	12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	KCNMB4	Q86W47	210 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	LMNTD2	Q8IXW0	634 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	ZNF398	Q8TD17	642 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	CERS2	Q96G23	380 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	VPS35	Q96QK1	796 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	TRIM56	Q9BRZ2	755 aa	Known RBP	12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	ZCCHC2	Q9C0B9	1178 aa	Known RBP	12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	CDC42EP4	Q9H3Q1	356 aa	Known RBP	12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	SUDS3	Q9H7L9	328 aa	Predicted RBP	12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	PHPT1	Q9NRX4	125 aa	Predicted RBP	12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	ZFAT	Q9P243	1243 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	TXNDC16	Q9P2K2	825 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	RAB21	Q9UL25	225 aa		12.44	□□□□□ -0.42
ABCD4-223	ENST00000555904	ZCWPW2	A0A1B0GU75	182 aa		12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	CFAP99	D6REC4	459 aa		12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904		K7ESM1	405 aa		12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	RAD51B	O15315	384 aa		12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	CD3EAP	O15446	510 aa	Known RBP	12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	CTIF	O43310	598 aa	Known RBP	12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	MAGEC1	O60732	1142 aa		12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	SLC25A14	O95258	325 aa	Predicted RBP	12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	ACSL3	O95573	720 aa		12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	TEAD1	P28347	426 aa		12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	CD38	P28907	300 aa		12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	SSTR1	P30872	391 aa		12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	AKT1	P31749	480 aa		12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	IGFALS	P35858	605 aa		12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	RABIF	P47224	123 aa		12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	TTPA	P49638	278 aa		12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	AFF3	P51826	1226 aa	Known RBP	12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	CLDN2	P57739	230 aa		12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	YPEL5	P62699	121 aa		12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	MGAT5	Q09328	741 aa		12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	OVGP1	Q12889	678 aa		12.43	□□□□□ -0.42
ABCD4-223	ENST00000555904	PEX6	Q13608	980 aa		12.43	□□□□□ -0.42

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