RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	PPP5C	P53041	499 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	CXCL9	Q07325	125 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	ZNF284	Q2VY69	593 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	IGSF11	Q5DX21	431 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	TCP11X2	Q5H9J9	407 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	C1orf141	Q5JVX7	400 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	WASHC2D	Q5SRD0	308 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	MANEA	Q5SRI9	462 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	TMEM198	Q66K66	360 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	SHC4	Q6S5L8	630 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	AACS	Q86V21	672 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	ARID3B	Q8IVW6	561 aa	Predicted RBP	4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	TRIB2	Q92519	343 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	EGLN2	Q96KS0	407 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	APOLD1	Q96LR9	279 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	CEP295NL	Q96MC4	621 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	DGAT2	Q96PD7	388 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	SH3GL2	Q99962	352 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	ISCU	Q9H1K1	167 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	PAG1	Q9NWQ8	432 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	OR6C3	Q9NZP0	311 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	UBA2	Q9UBT2	640 aa	Predicted RBP	4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	HS3ST3B1	Q9Y662	390 aa		4.41	□□□□□ -1.7
KTN1-222	ENST00000555506	LOC102723996	A0A087X1L8	192 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	LNP1	A1A4G5	178 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506		A6NL46	340 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	CCER2	I3L3R5	266 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506		I6L893	689 aa	Predicted RBP	4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	TPO	P07202	933 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	G6PD	P11413	515 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	EIF2S3	P41091	472 aa	Known RBP	4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	ECT2L	Q008S8	904 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	ROR1	Q01973	937 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	KLF9	Q13886	244 aa	Predicted RBP	4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	MYBPC2	Q14324	1141 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	GPR18	Q14330	331 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	RBMS2	Q15434	407 aa	Known RBP	4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	ALDH1L2	Q3SY69	923 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	ZNF805	Q5CZA5	627 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	MORN5	Q5VZ52	161 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506		Q6ZSV7	163 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	SHF	Q7M4L6	423 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	PLPPR4	Q7Z2D5	763 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	VSIG1	Q86XK7	387 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	MMP21	Q8N119	569 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	TDRD5	Q8NAT2	981 aa	Known RBP	4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	MCU	Q8NE86	351 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	KCNN2	Q9H2S1	579 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	PIGM	Q9H3S5	423 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	MAGIX	Q9H6Y5	334 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	EPB41L5	Q9HCM4	733 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	OR14J1	Q9UGF5	321 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	ANAPC2	Q9UJX6	822 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	BTBD3	Q9Y2F9	522 aa		4.4	□□□□□ -1.71
KTN1-222	ENST00000555506	KANSL1L	A0AUZ9	987 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506		A8MXE2	369 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	MAP2K7	O14733	419 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	SMAD9	O15198	467 aa	Known RBP	4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	ITM2A	O43736	263 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	VNN2	O95498	520 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	ICAM1	P05362	532 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	FGF2	P09038	288 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	MYBL1	P10243	752 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	GLUL	P15104	373 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	ME1	P48163	572 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	MMP14	P50281	582 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	RAD23A	P54725	363 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	SREBF2	Q12772	1141 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	GRSF1	Q12849	480 aa	Known RBP eCLIP	4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	GRIK2	Q13002	908 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	SNTB1	Q13884	538 aa	Known RBP	4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	PTGR1	Q14914	329 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	DLG2	Q15700	870 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	DAB2IP	Q5VWQ8	1189 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	ZNF425	Q6IV72	752 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	B3GNT6	Q6ZMB0	384 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	ZNF367	Q7RTV3	350 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	CTU1	Q7Z7A3	348 aa	Known RBP	4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	FAM9B	Q8IZU0	186 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	TMEM199	Q8N511	208 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	AADAT	Q8N5Z0	425 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	C7orf57	Q8NEG2	295 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	PTPMT1	Q8WUK0	201 aa	Predicted RBP	4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	SMG7	Q92540	1137 aa	Known RBP	4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	HAUS8	Q9BT25	410 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	ERVMER34-1	Q9H9K5	563 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	BCCIP	Q9P287	314 aa	Known RBP eCLIP	4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	C5AR2	Q9P296	337 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	SLC9A2	Q9UBY0	812 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	ACSL5	Q9ULC5	683 aa		4.39	□□□□□ -1.71
KTN1-222	ENST00000555506	IGLV5-39	A0A0G2JS06	123 aa		4.38	□□□□□ -1.71
KTN1-222	ENST00000555506		J3KR12	359 aa		4.38	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms