RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 KIAA1191Q96A73 305 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 MIEF2Q96C03 454 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 C3orf30Q96M34 536 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 TM6SF2Q9BZW4 377 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 DERL2Q9GZP9 239 aa24.18■■□□□ 1.46
TMEM260-207ENST00000555497 OAS3Q9Y6K5 1087 aaKnown RBP24.18■■□□□ 1.46
TMEM260-207ENST00000555497 ANKRD12Q6UB98 2062 aa24.17■■□□□ 1.46
TMEM260-207ENST00000555497 SMAD6O43541 496 aaKnown RBP24.17■■□□□ 1.46
TMEM260-207ENST00000555497 NIPSNAP2O75323 286 aa24.17■■□□□ 1.46
TMEM260-207ENST00000555497 CDK14O94921 469 aa24.17■■□□□ 1.46
TMEM260-207ENST00000555497 GABRR2P28476 465 aa24.17■■□□□ 1.46
TMEM260-207ENST00000555497 CLNS1AP54105 237 aaKnown RBP24.17■■□□□ 1.46
TMEM260-207ENST00000555497 ZRANB3Q5FWF4 1079 aa24.17■■□□□ 1.46
TMEM260-207ENST00000555497 AAGABQ6PD74 315 aa24.17■■□□□ 1.46
TMEM260-207ENST00000555497 MAB21L3Q8N8X9 362 aa24.17■■□□□ 1.46
TMEM260-207ENST00000555497 SLC26A7Q8TE54 656 aa24.17■■□□□ 1.46
TMEM260-207ENST00000555497 NPAS2Q99743 824 aa24.17■■□□□ 1.46
TMEM260-207ENST00000555497 CCDC68Q9H2F9 335 aa24.17■■□□□ 1.46
TMEM260-207ENST00000555497 SYTL2Q9HCH5 934 aa24.17■■□□□ 1.46
TMEM260-207ENST00000555497 PLK2Q9NYY3 685 aa24.17■■□□□ 1.46
TMEM260-207ENST00000555497 LCHNA4D1U4 455 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 CDC7O00311 574 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 ACRP10323 421 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 ACADSP16219 412 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 CTPS1P17812 591 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 RFC2P35250 354 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 TSNQ15631 228 aaKnown RBP24.16■■□□□ 1.46
TMEM260-207ENST00000555497 FBXO48Q5FWF7 155 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 AFAP1L2Q8N4X5 818 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 CDRT15Q96T59 188 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 DOCK6Q96HP0 2047 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 ATP6AP2A0A1C7CYW4 349 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 TGM5O43548 720 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 ATP6AP2O75787 350 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 CNPP09543 421 aaKnown RBP24.16■■□□□ 1.46
TMEM260-207ENST00000555497 ALPIP09923 528 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 XIAPP98170 497 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 PABPC1LQ4VXU2 614 aaKnown RBP24.16■■□□□ 1.46
TMEM260-207ENST00000555497 C16orf89Q6UX73 402 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 ITIH5Q86UX2 942 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 CAMK1DQ8IU85 385 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 SNX31Q8N9S9 440 aa24.16■■□□□ 1.46
TMEM260-207ENST00000555497 A0A1B0GTL3 188 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 KERAO60938 352 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 HSPA1AP0DMV8 641 aaKnown RBP24.15■■□□□ 1.46
TMEM260-207ENST00000555497 HSPA1BP0DMV9 641 aaKnown RBP24.15■■□□□ 1.46
TMEM260-207ENST00000555497 ENO3P13929 434 aaPredicted RBP24.15■■□□□ 1.46
TMEM260-207ENST00000555497 PKMP14618 531 aaKnown RBP24.15■■□□□ 1.46
TMEM260-207ENST00000555497 GJA1P17302 382 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 FOXA1P55317 472 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 MFN1Q8IWA4 741 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 DCAF4L2Q8NA75 395 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 SIDT2Q8NBJ9 832 aaKnown RBP24.15■■□□□ 1.46
TMEM260-207ENST00000555497 LRRC3Q9BY71 257 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 FBRSL1Q9HCM7 1045 aaKnown RBP24.15■■□□□ 1.46
TMEM260-207ENST00000555497 NDE1Q9NXR1 346 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 IL17CQ9P0M4 197 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 PRPF19Q9UMS4 504 aaKnown RBP24.15■■□□□ 1.46
TMEM260-207ENST00000555497 PTGDR2Q9Y5Y4 395 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 PTPRSQ13332 1948 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 TRIM43BA6NCK2 446 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 STX16-NPEPL1H3BU86 382 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 UBDO15205 165 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 ECI2O75521 394 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 TSPAN12O95859 305 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 GFAPP14136 432 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 CA8P35219 290 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 THOP1P52888 689 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 RAD51Q06609 339 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 LRRC26Q2I0M4 334 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 LARP4Q71RC2 724 aaKnown RBP eCLIP24.15■■□□□ 1.46
TMEM260-207ENST00000555497 LYSMD3Q7Z3D4 306 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 BBS7Q8IWZ6 715 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 STAG3L4Q8TBR4 150 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 TRIM43Q96BQ3 446 aaPredicted RBP24.15■■□□□ 1.46
TMEM260-207ENST00000555497 RNF112Q9ULX5 631 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 ZNF711Q9Y462 761 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 DNAJC15Q9Y5T4 150 aa24.15■■□□□ 1.46
TMEM260-207ENST00000555497 NPEPPSL1A6NEC2 478 aa24.14■■□□□ 1.46
TMEM260-207ENST00000555497 EIF4E1BA6NMX2 242 aaKnown RBP24.14■■□□□ 1.46
TMEM260-207ENST00000555497 SUPT3HB4E1H0 165 aa24.14■■□□□ 1.46
TMEM260-207ENST00000555497 H7C0S8 307 aa24.14■■□□□ 1.46
TMEM260-207ENST00000555497 CFLARO15519 480 aa24.14■■□□□ 1.46
TMEM260-207ENST00000555497 SUPT3HO75486 399 aa24.14■■□□□ 1.46
TMEM260-207ENST00000555497 GKP32189 559 aa24.14■■□□□ 1.46
TMEM260-207ENST00000555497 PKNOX1P55347 436 aa24.14■■□□□ 1.46
TMEM260-207ENST00000555497 PIGGQ5H8A4 983 aa24.14■■□□□ 1.46
TMEM260-207ENST00000555497 TMC8Q8IU68 726 aa24.14■■□□□ 1.46
TMEM260-207ENST00000555497 DDI1Q8WTU0 396 aa24.14■■□□□ 1.46
TMEM260-207ENST00000555497 PIH1D2Q8WWB5 315 aa24.14■■□□□ 1.46
TMEM260-207ENST00000555497 FUBP1Q96AE4 644 aaKnown RBP24.14■■□□□ 1.46
TMEM260-207ENST00000555497 CCDC97Q96F63 343 aaPredicted RBP24.14■■□□□ 1.46
TMEM260-207ENST00000555497 WDR41Q9HAD4 459 aa24.14■■□□□ 1.46
TMEM260-207ENST00000555497 EFCAB1Q9HAE3 211 aa24.14■■□□□ 1.46
TMEM260-207ENST00000555497 MID1IP1Q9NPA3 183 aa24.14■■□□□ 1.46
TMEM260-207ENST00000555497 CFAP97Q9P2B7 532 aa24.14■■□□□ 1.46
TMEM260-207ENST00000555497 TYW5A2RUC4 315 aaKnown RBP24.14■■□□□ 1.45
TMEM260-207ENST00000555497 CLASP2O75122 1294 aaKnown RBP24.14■■□□□ 1.45
TMEM260-207ENST00000555497 MSX2P35548 267 aaPredicted RBP24.14■■□□□ 1.45
TMEM260-207ENST00000555497 TTPAP49638 278 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms