RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 PHPT1Q9NRX4 125 aaPredicted RBP14.21□□□□□ -0.13
CHD8-208ENST00000555301 MTRF1LQ9UGC7 380 aaKnown RBP14.21□□□□□ -0.13
CHD8-208ENST00000555301 FKBPLQ9UIM3 349 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 CA5BQ9Y2D0 317 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 FNDC3AQ9Y2H6 1198 aaKnown RBP14.21□□□□□ -0.13
CHD8-208ENST00000555301 SLCO1B1Q9Y6L6 691 aa14.21□□□□□ -0.13
CHD8-208ENST00000555301 ANKRD36A6QL64 1941 aa14.21□□□□□ -0.14
CHD8-208ENST00000555301 CCDC78A2IDD5 438 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 E7ESA3 106 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 K7ESM1 405 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 TLR4O00206 839 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 CACNB4O00305 520 aaPredicted RBP14.2□□□□□ -0.14
CHD8-208ENST00000555301 SRP72O76094 671 aaKnown RBP14.2□□□□□ -0.14
CHD8-208ENST00000555301 USP1O94782 785 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 PRAMEF1O95521 474 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 TTC4O95801 387 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 SOD1P00441 154 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 POLBP06746 335 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 PGAM1P18669 254 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 HTR1BP28222 390 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 THOP1P52888 689 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 PRAMEP78395 509 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 XIAPP98170 497 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 NHLH1Q02575 133 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 PTK2BQ14289 1009 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 HLTFQ14527 1009 aaKnown RBP eCLIP14.2□□□□□ -0.14
CHD8-208ENST00000555301 MSS51Q4VC12 460 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 SLC23A3Q6PIS1 610 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 CEP128Q6ZU80 1094 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 TMEM135Q86UB9 458 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 HEATR4Q86WZ0 1026 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 PELI3Q8N2H9 469 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 OR13H1Q8NG92 308 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 ZNF398Q8TD17 642 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 TBATAQ96M53 351 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 ZNF778Q96MU6 729 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 PWWP2AQ96N64 755 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 VPS35Q96QK1 796 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 AGAP2Q99490 1192 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 TEX101Q9BY14 249 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 TSPYL1Q9H0U9 437 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 TREX1Q9NSU2 369 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 ZDHHC18Q9NUE0 388 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 NCDNQ9UBB6 729 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 SLC2A6Q9UGQ3 507 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 SLC6A14Q9UN76 642 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 OR1A2Q9Y585 309 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 SLC30A1Q9Y6M5 507 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 RPS6KL1Q9Y6S9 549 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 EML5Q05BV3 1969 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 WDFY4Q6ZS81 3184 aa14.2□□□□□ -0.14
CHD8-208ENST00000555301 FADS2P1A8MWK0 482 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 KHNYNO15037 678 aaKnown RBP14.19□□□□□ -0.14
CHD8-208ENST00000555301 LRP3O75074 770 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 WNT1P04628 370 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 CFIP05156 583 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 MYCLP1P12525 358 aaPredicted RBP14.19□□□□□ -0.14
CHD8-208ENST00000555301 ITGALP20701 1170 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 KELP23276 732 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 NMBRP28336 390 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 MC4RP32245 332 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 CSNK1EP49674 416 aaKnown RBP14.19□□□□□ -0.14
CHD8-208ENST00000555301 KIAA1024LP59773 190 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 CDK3Q00526 305 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 PDIA2Q13087 525 aaKnown RBP14.19□□□□□ -0.14
CHD8-208ENST00000555301 NFATC2Q13469 925 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 PEX6Q13608 980 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 PDE1CQ14123 709 aaPredicted RBP14.19□□□□□ -0.14
CHD8-208ENST00000555301 NFATC4Q14934 902 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 CHRNA6Q15825 494 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 GPR33Q49SQ1 333 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 ANKRD20A4Q4UJ75 823 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 ATP13A5Q4VNC0 1218 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 TRIM61Q5EBN2 209 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 PLA2G2CQ5R387 149 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 AFTPHQ6ULP2 937 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 SNX20Q7Z614 316 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 PHYKPLQ8IUZ5 450 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 AGGF1Q8N302 714 aaeCLIP14.19□□□□□ -0.14
CHD8-208ENST00000555301 GPR161Q8N6U8 529 aaKnown RBP14.19□□□□□ -0.14
CHD8-208ENST00000555301 BTN2A2Q8WVV5 523 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 UBXN4Q92575 508 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 RUBCNQ92622 972 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 GLYATL1Q969I3 302 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 HDAC10Q969S8 669 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 FUBP1Q96AE4 644 aaKnown RBP14.19□□□□□ -0.14
CHD8-208ENST00000555301 MFSD3Q96ES6 412 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 SGSM3Q96HU1 749 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 HIC2Q96JB3 615 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 NUSAP1Q9BXS6 441 aaKnown RBP14.19□□□□□ -0.14
CHD8-208ENST00000555301 ASB8Q9H765 288 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 GPR27Q9NS67 375 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 SMOXQ9NWM0 555 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 TEX264Q9Y6I9 313 aa14.19□□□□□ -0.14
CHD8-208ENST00000555301 USP34Q70CQ2 3546 aa14.18□□□□□ -0.14
CHD8-208ENST00000555301 SPTY2D1-AS1A0A0U1RR47 76 aa14.18□□□□□ -0.14
CHD8-208ENST00000555301 A0A1B0GVT2 93 aa14.18□□□□□ -0.14
CHD8-208ENST00000555301 CCL22O00626 93 aa14.18□□□□□ -0.14
CHD8-208ENST00000555301 GAPDHSO14556 408 aaPredicted RBP14.18□□□□□ -0.14
CHD8-208ENST00000555301 SYPP08247 313 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms