RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 IGLV3-27P01718 113 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 FYNP06241 537 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 ELANEP08246 267 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 HMBSP08397 361 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 KRT5P13647 590 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 TYRP14679 529 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 AGXTP21549 392 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 BCKDHBP21953 392 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 PON1P27169 355 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 GPD2P43304 727 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 TNFRSF4P43489 277 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 MFAP3P55082 362 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 SLC8A3P57103 927 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 HSD11B2P80365 405 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 MXRA7P84157 204 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 OCA2Q04671 838 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 GOLGA8FQ08AF8 430 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 GOLGA8DPQ0D2H9 430 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 CETN1Q12798 172 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 CNGA2Q16280 664 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 MEA1Q16626 185 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 GEN1Q17RS7 908 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 PLK5Q496M5 336 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 EOGTQ5NDL2 527 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 C10orf76Q5T2E6 689 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 BSPRYQ5W0U4 402 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 ANO7Q6IWH7 933 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 DENND1BQ6P3S1 775 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 GBP6Q6ZN66 633 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 RBM43Q6ZSC3 357 aaKnown RBP4.3□□□□□ -1.72
VTI1B-203ENST00000554636 TPGS1Q6ZTW0 290 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 CACNA2D4Q7Z3S7 1137 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.3□□□□□ -1.72
VTI1B-203ENST00000554636 KBTBD6Q86V97 674 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 FMNL3Q8IVF7 1028 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 RHOT2Q8IXI1 618 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 RHOT1Q8IXI2 618 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 SIX6OS1Q8N1H7 587 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 CPXM2Q8N436 756 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 CCDC26Q8TAB7 109 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 OLIG1Q8TAK6 271 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 GPT2Q8TD30 523 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 DQX1Q8TE96 717 aaKnown RBP4.3□□□□□ -1.72
VTI1B-203ENST00000554636 CLEC4CQ8WTT0 213 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 IRGQQ8WZA9 623 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 SHC3Q92529 594 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 ZC3H10Q96K80 434 aaKnown RBP4.3□□□□□ -1.72
VTI1B-203ENST00000554636 HSFY1Q96LI6 401 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 CRACR2AQ9BSW2 395 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 BBS2Q9BXC9 721 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 DCLK3Q9C098 648 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 REXO4Q9GZR2 422 aaKnown RBP4.3□□□□□ -1.72
VTI1B-203ENST00000554636 NUP62CLQ9H1M0 184 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 UBE2TQ9NPD8 197 aaPredicted RBP4.3□□□□□ -1.72
VTI1B-203ENST00000554636 ACP6Q9NPH0 428 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 OLA1Q9NTK5 396 aaKnown RBP4.3□□□□□ -1.72
VTI1B-203ENST00000554636 KLHL11Q9NVR0 708 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 DLL3Q9NYJ7 618 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 WDR35Q9P2L0 1181 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 DEC1Q9P2X7 70 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 TESQ9UGI8 421 aaKnown RBP4.3□□□□□ -1.72
VTI1B-203ENST00000554636 ZNHIT2Q9UHR6 403 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 CYTH4Q9UIA0 394 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 STOML2Q9UJZ1 356 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 RAB23Q9ULC3 237 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 CLEC4EQ9ULY5 219 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 ZNF510Q9Y2H8 683 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 HBS1LQ9Y450 684 aaKnown RBP4.3□□□□□ -1.72
VTI1B-203ENST00000554636 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.3□□□□□ -1.72
VTI1B-203ENST00000554636 NCOR2Q9Y618 2525 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 NUMA1Q14980 2115 aa4.3□□□□□ -1.72
VTI1B-203ENST00000554636 CACNA1EQ15878 2313 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 ASCC3Q8N3C0 2202 aaKnown RBP4.29□□□□□ -1.72
VTI1B-203ENST00000554636 A0A1B0GTW7 788 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 A0A1W2PQF6 199 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 TCRBV21S2A2A0A5A6 115 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 CDHR4A6H8M9 788 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 TBC1D3BA6NDS4 549 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 FAM171A2A8MVW0 826 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 E5RJQ4 531 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 DCLK1O15075 740 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 PAPSS1O43252 624 aaPredicted RBP4.29□□□□□ -1.72
VTI1B-203ENST00000554636 THAP12O43422 761 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 PPFIA2O75334 1257 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 LETM1O95202 739 aaPredicted RBP4.29□□□□□ -1.72
VTI1B-203ENST00000554636 LATS1O95835 1130 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 IGLV3-25P01717 112 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 AMY1AP04745 511 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 CFIP05156 583 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 PNMA6AP0CW24 399 aaPredicted RBP4.29□□□□□ -1.72
VTI1B-203ENST00000554636 MYBL2P10244 700 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 HOXB2P14652 356 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 HOXD9P28356 352 aaPredicted RBP4.29□□□□□ -1.72
VTI1B-203ENST00000554636 P2RY2P41231 377 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 IL12RB1P42701 662 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 WASP42768 502 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 MTIF2P46199 727 aaKnown RBP4.29□□□□□ -1.72
VTI1B-203ENST00000554636 SGSHP51688 502 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 DGKEP52429 567 aa4.29□□□□□ -1.72
VTI1B-203ENST00000554636 ATXN1P54253 815 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms