RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 KAZNQ674X7 775 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 RWDD4Q6NW29 188 aaKnown RBP6.43□□□□□ -1.38
SCFD1-212ENST00000554486 BMP8AQ7Z5Y6 402 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 NLRP14Q86W24 1093 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 SLC13A5Q86YT5 568 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-212ENST00000554486 RFX6Q8HWS3 928 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 CCDC50Q8IVM0 306 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 MAP7D3Q8IWC1 876 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 MFSD6LQ8IWD5 586 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 RAVER1Q8IY67 606 aaKnown RBP6.43□□□□□ -1.38
SCFD1-212ENST00000554486 CFAP52Q8N1V2 620 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 RASGEF1CQ8N431 466 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 CPXM2Q8N436 756 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 TDRD5Q8NAT2 981 aaKnown RBP6.43□□□□□ -1.38
SCFD1-212ENST00000554486 KIF18AQ8NI77 898 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 FGF14Q92915 247 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 ELSPBP1Q96BH3 223 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 TBC1D31Q96DN5 1066 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 ZFYVE19Q96K21 471 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 DDX50Q9BQ39 737 aaKnown RBP6.43□□□□□ -1.38
SCFD1-212ENST00000554486 HEMGNQ9BXL5 484 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 CALN1Q9BXU9 219 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 OSBPL8Q9BZF1 889 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 KLC2Q9H0B6 622 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 DUS2Q9NX74 493 aaKnown RBP6.43□□□□□ -1.38
SCFD1-212ENST00000554486 MPP6Q9NZW5 540 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 RCOR3Q9P2K3 495 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-212ENST00000554486 TBC1D14Q9P2M4 693 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 PRSS50Q9UI38 385 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 ADAM29Q9UKF5 820 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 EDARQ9UNE0 448 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 SAR1BQ9Y6B6 198 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 SHROOM3Q8TF72 1996 aa6.43□□□□□ -1.38
SCFD1-212ENST00000554486 TCF20Q9UGU0 1960 aaKnown RBP6.43□□□□□ -1.38
SCFD1-212ENST00000554486 NYNRINQ9P2P1 1898 aaKnown RBP6.43□□□□□ -1.38
SCFD1-212ENST00000554486 COL4A3Q01955 1670 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 MYO18AQ92614 2054 aaKnown RBP6.42□□□□□ -1.38
SCFD1-212ENST00000554486 SLC9A3R1O14745 358 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-212ENST00000554486 CST8O60676 142 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 TBL1XO60907 577 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 URI1O94763 535 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-212ENST00000554486 MT-CO1P00395 513 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 FGGP02679 453 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 ZNF888P0CJ79 500 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-212ENST00000554486 IL9P15248 144 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 HOXD9P28356 352 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-212ENST00000554486 CHKAP35790 457 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 ETV4P43268 484 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 IFNAR2P48551 515 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 MTNR1BP49286 362 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 SRSF2Q01130 221 aaKnown RBP6.42□□□□□ -1.38
SCFD1-212ENST00000554486 GBE1Q04446 702 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 PLP2Q04941 152 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 SLC10A2Q12908 348 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-212ENST00000554486 SIX1Q15475 284 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-212ENST00000554486 UGT8Q16880 541 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.42□□□□□ -1.38
SCFD1-212ENST00000554486 ODF2Q5BJF6 829 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 RABGAP1LQ5R372 815 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 LY6G5CQ5SRR4 150 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 NCBP2-AS2Q69YL0 99 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 SLC9A4Q6AI14 798 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 RHBDF2Q6PJF5 856 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 NPNTQ6UXI9 565 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 LRRC31Q6UY01 552 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 TPGS1Q6ZTW0 290 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 BBS12Q6ZW61 710 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 MTSS1LQ765P7 747 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 TMEM25Q86YD3 366 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 NPWQ8N729 165 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 PLD5Q8N7P1 536 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 RTL3Q8N8U3 475 aaKnown RBP6.42□□□□□ -1.38
SCFD1-212ENST00000554486 OR52K2Q8NGK3 314 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 PPP1R14CQ8TAE6 165 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 WFDC5Q8TCV5 224 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 ACTRT1Q8TDG2 376 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 TSPEARQ8WU66 669 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 DEPDC1BQ8WUY9 529 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 OSCP1Q8WVF1 389 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 RSAD2Q8WXG1 361 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 OTUB2Q96DC9 234 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 TMA16Q96EY4 203 aaKnown RBP6.42□□□□□ -1.38
SCFD1-212ENST00000554486 RPGRIP1Q96KN7 1286 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 CAPZA3Q96KX2 299 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 RPRD1AQ96P16 312 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-212ENST00000554486 SMAD5Q99717 465 aaKnown RBP6.42□□□□□ -1.38
SCFD1-212ENST00000554486 ZYG11BQ9C0D3 744 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 TMEM168Q9H0V1 697 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 HPS4Q9NQG7 708 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 RRAGDQ9NQL2 400 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-212ENST00000554486 TMEM248Q9NWD8 314 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 EVLQ9UI08 416 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-212ENST00000554486 CDC23Q9UJX2 597 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 FBXO10Q9UK96 956 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 TTC7AQ9ULT0 858 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-212ENST00000554486 R3HDM2Q9Y2K5 976 aaKnown RBP6.42□□□□□ -1.38
SCFD1-212ENST00000554486 NR2E1Q9Y466 385 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 MRFAP1Q9Y605 127 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 TICRRQ7Z2Z1 1910 aa6.42□□□□□ -1.38
SCFD1-212ENST00000554486 COL4A2P08572 1712 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms