RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 PATE1Q8WXA2 126 aa11.83□□□□□ -0.52
TRAPPC6B-204ENST00000554018 RNF25Q96BH1 459 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC6B-204ENST00000554018 SCARF2Q96GP6 870 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC6B-204ENST00000554018 TMEM74Q96NL1 305 aa11.83□□□□□ -0.52
TRAPPC6B-204ENST00000554018 UBL7Q96S82 380 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC6B-204ENST00000554018 MAK16Q9BXY0 300 aaKnown RBP11.83□□□□□ -0.52
TRAPPC6B-204ENST00000554018 DPH1Q9BZG8 443 aa11.83□□□□□ -0.52
TRAPPC6B-204ENST00000554018 STRADBQ9C0K7 418 aa11.83□□□□□ -0.52
TRAPPC6B-204ENST00000554018 RPL26L1Q9UNX3 145 aaKnown RBP11.83□□□□□ -0.52
TRAPPC6B-204ENST00000554018 SPTA1P02549 2419 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 SDK2Q58EX2 2172 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 C1orf232A0A0U1RR37 186 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 RHPN2P1A8MT19 583 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 AKR1B15C9JRZ8 316 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 APOL1O14791 398 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 ITGA2BP08514 1039 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 ALDH4A1P30038 563 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 CCKBRP32239 447 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 ACTR1BP42025 376 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 ACTR1AP61163 376 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 DYNLT1P63172 113 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 ZFP36L1Q07352 338 aaKnown RBP11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 GALNT3Q14435 633 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 AMZ1Q400G9 498 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 ARHGAP40Q5TG30 622 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 LRRC38Q5VT99 294 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 BROXQ5VW32 411 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 USP53Q70EK8 1073 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 KDELC2Q7Z4H8 507 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 VSIG1Q86XK7 387 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 RFX6Q8HWS3 928 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 CNGA4Q8IV77 575 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 EXD1Q8NHP7 514 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 COX14Q96I36 57 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 AGAP3Q96P47 875 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 OR2M4Q96R27 311 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 WDR24Q96S15 920 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 LYSMD1Q96S90 227 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 MLPHQ9BV36 600 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 SEMA6CQ9H3T2 930 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 SEPT10Q9P0V9 454 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 DNPEPQ9ULA0 475 aa11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 CNOT6Q9ULM6 557 aaKnown RBP11.82□□□□□ -0.52
TRAPPC6B-204ENST00000554018 FLNBO75369 2602 aaKnown RBP11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 EIF4E1BA6NMX2 242 aaKnown RBP11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 ANKRD66B4E2M5 251 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 ATXN7O15265 892 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 ASMTLO95671 621 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 PRB1P04280 392 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 ATP1A1P05023 1023 aaKnown RBP11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 PYGLP06737 847 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 COMTP21964 271 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 SLC5A2P31639 672 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 MLLT3P42568 568 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 SPINT3P49223 89 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 UCNP55089 124 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 TMPRSS3P57727 454 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 EIF3IQ13347 325 aaKnown RBP11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 PDK1Q15118 436 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 TCEAL1Q15170 157 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 LLGL1Q15334 1064 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 PYCR3Q53H96 274 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 ODF2Q5BJF6 829 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 PHF19Q5T6S3 580 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 MFSD7Q6UXD7 560 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 ZNF438Q7Z4V0 828 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 JAMLQ86YT9 394 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 GALNT13Q8IUC8 556 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 SLITRK4Q8IW52 837 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 RHOT1Q8IXI2 618 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 NAGSQ8N159 534 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 IMP4Q96G21 291 aaKnown RBP11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 OLFM3Q96PB7 478 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 TRIB3Q96RU7 358 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 ADGRE3Q9BY15 652 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 BRD8Q9H0E9 1235 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 CDH19Q9H159 772 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 FAM83DQ9H4H8 585 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 RDH14Q9HBH5 336 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 SAE1Q9UBE0 346 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 PISDQ9UG56 409 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 ZNHIT2Q9UHR6 403 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 INTUQ9ULD6 942 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 SSUH2Q9Y2M2 353 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 PRKAB1Q9Y478 270 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 LOXL2Q9Y4K0 774 aa11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 PCYT1BQ9Y5K3 369 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 OAS3Q9Y6K5 1087 aaKnown RBP11.81□□□□□ -0.52
TRAPPC6B-204ENST00000554018 TRBV23OR9-2A0A075B6M9 112 aa11.8□□□□□ -0.52
TRAPPC6B-204ENST00000554018 TEX51A0A1B0GUA7 166 aa11.8□□□□□ -0.52
TRAPPC6B-204ENST00000554018 FADS2P1A8MWK0 482 aa11.8□□□□□ -0.52
TRAPPC6B-204ENST00000554018 PPP1R12AO14974 1030 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC6B-204ENST00000554018 PPM1DO15297 605 aa11.8□□□□□ -0.52
TRAPPC6B-204ENST00000554018 SPOPO43791 374 aa11.8□□□□□ -0.52
TRAPPC6B-204ENST00000554018 CPNE6O95741 557 aa11.8□□□□□ -0.52
TRAPPC6B-204ENST00000554018 EML2O95834 649 aa11.8□□□□□ -0.52
TRAPPC6B-204ENST00000554018 PIRTP0C851 137 aa11.8□□□□□ -0.52
TRAPPC6B-204ENST00000554018 JMJD7P0C870 316 aa11.8□□□□□ -0.52
TRAPPC6B-204ENST00000554018 ZFXP17010 805 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC6B-204ENST00000554018 CD1CP29017 333 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms