RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 ACCSQ96QU6 501 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 USP28Q96RU2 1077 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 MMS19Q96T76 1030 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 CGRRF1Q99675 332 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 BBS2Q9BXC9 721 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 C1QTNF7Q9BXJ2 289 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 ELOVL4Q9GZR5 314 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 TMEM245Q9H330 911 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 PIF1Q9H611 641 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 MRPL44Q9H9J2 332 aaKnown RBP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 CPNE5Q9HCH3 593 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 PRSS16Q9NQE7 514 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 FAM49BQ9NUQ9 324 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 FBXO34Q9NWN3 711 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 DEC1Q9P2X7 70 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 SCOCQ9UIL1 159 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 NOL7Q9UMY1 257 aaKnown RBP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 DMTF1Q9Y222 760 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 CA5BQ9Y2D0 317 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 ANKRD6Q9Y2G4 727 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 MTO1Q9Y2Z2 717 aaKnown RBP3.28□□□□□ -1.88
SLIRP-202ENST00000553981 PCDHB1Q9Y5F3 818 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 U3KQA8 63 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 KNL1Q8NG31 2342 aa3.28□□□□□ -1.88
SLIRP-202ENST00000553981 KIF26BQ2KJY2 2108 aa3.28□□□□□ -1.89
SLIRP-202ENST00000553981 A0A1B0GTQ1 180 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 A8MXQ7 604 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 H0YCG3 227 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 TRIM38O00635 465 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 TNFSF14O43557 240 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 BRINP1O60477 761 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 ZNF217O75362 1048 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 HMBSP08397 361 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 TMEM191BP0C7N4 346 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 DLATP10515 647 aaKnown RBP3.27□□□□□ -1.89
SLIRP-202ENST00000553981 RARGP13631 454 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 PAX3P23760 479 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 HOXD9P28356 352 aaPredicted RBP3.27□□□□□ -1.89
SLIRP-202ENST00000553981 ADORA2BP29275 332 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 CORO1AP31146 461 aaKnown RBP3.27□□□□□ -1.89
SLIRP-202ENST00000553981 CD70P32970 193 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 LONP1P36776 959 aaKnown RBP3.27□□□□□ -1.89
SLIRP-202ENST00000553981 UBA7P41226 1012 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 MATKP42679 507 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 ZNF81P51508 661 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 CYP2J2P51589 502 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 NDST1P52848 882 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 PER3P56645 1201 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 HMGN5P82970 282 aaKnown RBP3.27□□□□□ -1.89
SLIRP-202ENST00000553981 SEMG2Q02383 582 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 CEBPZQ03701 1054 aaKnown RBP3.27□□□□□ -1.89
SLIRP-202ENST00000553981 CCDC173Q0VFZ6 552 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 PSMD6Q15008 389 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 ADRM1Q16186 407 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 LINC00303Q3SY05 128 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 RILPL1Q5EBL4 403 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 FSCBQ5H9T9 825 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 HES3Q5TGS1 186 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 HIST2H2BCQ6DN03 193 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 NADSYN1Q6IA69 706 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 ZNF529Q6P280 563 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 FOXR2Q6PJQ5 311 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 C4orf50Q6ZRC1 276 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 MMS22LQ6ZRQ5 1243 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 THNSL2Q86YJ6 484 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 WDR49Q8IV35 697 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 NELFCDQ8IXH7 590 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 FAM217AQ8IXS0 508 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 CRYBG2Q8N1P7 616 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 PQLC1Q8N2U9 271 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 SLC25A45Q8N413 288 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 AADATQ8N5Z0 425 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 EXD3Q8N9H8 876 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 FAM184AQ8NB25 1140 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 CLRN3Q8NCR9 226 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 KIAA0895Q8NCT3 520 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 CADM4Q8NFZ8 388 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 OR52K2Q8NGK3 314 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 PARD3BQ8TEW8 1205 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 HOXB13Q92826 284 aaPredicted RBP3.27□□□□□ -1.89
SLIRP-202ENST00000553981 SEMA4DQ92854 862 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 CCDC127Q96BQ5 260 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 HVCN1Q96D96 273 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 OTUB2Q96DC9 234 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 MFSD3Q96ES6 412 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 SIPA1Q96FS4 1042 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 MARS2Q96GW9 593 aaKnown RBP3.27□□□□□ -1.89
SLIRP-202ENST00000553981 ANKRD36BP1Q96IX9 119 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 AK8Q96MA6 479 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 PRICKLE1Q96MT3 831 aaPredicted RBP3.27□□□□□ -1.89
SLIRP-202ENST00000553981 HNRNPABQ99729 332 aaKnown RBP3.27□□□□□ -1.89
SLIRP-202ENST00000553981 MYOCQ99972 504 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 HEPHQ9BQS7 1158 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 TRIM4Q9C037 500 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 NEUROG2Q9H2A3 272 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 BLZF1Q9H2G9 400 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 LDAHQ9H6V9 325 aa3.27□□□□□ -1.89
SLIRP-202ENST00000553981 OLFML3Q9NRN5 406 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms