RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 CTSEP14091 401 aa22.69■■□□□ 1.22
TDP1-206ENST00000553569 FDFT1P37268 417 aa22.69■■□□□ 1.22
TDP1-206ENST00000553569 LMAN1P49257 510 aa22.69■■□□□ 1.22
TDP1-206ENST00000553569 DCDC1P59894 354 aa22.69■■□□□ 1.22
TDP1-206ENST00000553569 KCTD19Q17RG1 926 aaPredicted RBP22.69■■□□□ 1.22
TDP1-206ENST00000553569 HS1BP3Q53T59 392 aa22.69■■□□□ 1.22
TDP1-206ENST00000553569 HIC2Q96JB3 615 aa22.69■■□□□ 1.22
TDP1-206ENST00000553569 CNDP2Q96KP4 475 aaKnown RBP22.69■■□□□ 1.22
TDP1-206ENST00000553569 NAPGQ99747 312 aaPredicted RBP22.69■■□□□ 1.22
TDP1-206ENST00000553569 CYP4F12Q9HCS2 524 aa22.69■■□□□ 1.22
TDP1-206ENST00000553569 RAB6BQ9NRW1 208 aa22.69■■□□□ 1.22
TDP1-206ENST00000553569 ARL5AQ9Y689 179 aa22.69■■□□□ 1.22
TDP1-206ENST00000553569 ARID1BQ8NFD5 2236 aaPredicted RBP22.68■■□□□ 1.22
TDP1-206ENST00000553569 PRSS38A1L453 326 aa22.68■■□□□ 1.22
TDP1-206ENST00000553569 NEMP2A6NFY4 417 aa22.68■■□□□ 1.22
TDP1-206ENST00000553569 E7EVH7 732 aa22.68■■□□□ 1.22
TDP1-206ENST00000553569 TNFRSF10CO14798 259 aa22.68■■□□□ 1.22
TDP1-206ENST00000553569 PSMD3O43242 534 aa22.68■■□□□ 1.22
TDP1-206ENST00000553569 LDOC1O95751 146 aaPredicted RBP22.68■■□□□ 1.22
TDP1-206ENST00000553569 CELA2BP08218 269 aaPredicted RBP22.68■■□□□ 1.22
TDP1-206ENST00000553569 ALPPL2P10696 532 aa22.68■■□□□ 1.22
TDP1-206ENST00000553569 TCP1P17987 556 aaKnown RBP22.68■■□□□ 1.22
TDP1-206ENST00000553569 RPL22P35268 128 aaKnown RBP22.68■■□□□ 1.22
TDP1-206ENST00000553569 HMGCLP35914 325 aa22.68■■□□□ 1.22
TDP1-206ENST00000553569 POLD2P49005 469 aa22.68■■□□□ 1.22
TDP1-206ENST00000553569 DEFB133Q30KQ1 61 aa22.68■■□□□ 1.22
TDP1-206ENST00000553569 N4BP2L1Q5TBK1 243 aaPredicted RBP22.68■■□□□ 1.22
TDP1-206ENST00000553569 DENND5AQ6IQ26 1287 aa22.68■■□□□ 1.22
TDP1-206ENST00000553569 ERMP1Q7Z2K6 904 aa22.68■■□□□ 1.22
TDP1-206ENST00000553569 OR4C6Q8NH72 309 aa22.68■■□□□ 1.22
TDP1-206ENST00000553569 ACTRT1Q8TDG2 376 aa22.68■■□□□ 1.22
TDP1-206ENST00000553569 MAGOHBQ96A72 148 aaKnown RBP22.68■■□□□ 1.22
TDP1-206ENST00000553569 FRMD8Q9BZ67 464 aaPredicted RBP22.68■■□□□ 1.22
TDP1-206ENST00000553569 PIH1D1Q9NWS0 290 aaKnown RBP22.68■■□□□ 1.22
TDP1-206ENST00000553569 TMEM98Q9Y2Y6 226 aa22.68■■□□□ 1.22
TDP1-206ENST00000553569 PKP3Q9Y446 797 aa22.68■■□□□ 1.22
TDP1-206ENST00000553569 DGKBQ9Y6T7 804 aa22.68■■□□□ 1.22
TDP1-206ENST00000553569 CES2O00748 559 aa22.67■■□□□ 1.22
TDP1-206ENST00000553569 SIGLEC6O43699 453 aa22.67■■□□□ 1.22
TDP1-206ENST00000553569 CEACAM5P06731 702 aa22.67■■□□□ 1.22
TDP1-206ENST00000553569 PTPRCAPQ14761 206 aa22.67■■□□□ 1.22
TDP1-206ENST00000553569 CCDC157Q569K6 752 aa22.67■■□□□ 1.22
TDP1-206ENST00000553569 PTCD2Q8WV60 388 aaKnown RBP22.67■■□□□ 1.22
TDP1-206ENST00000553569 TBATAQ96M53 351 aa22.67■■□□□ 1.22
TDP1-206ENST00000553569 ZSCAN5AQ9BUG6 496 aa22.67■■□□□ 1.22
TDP1-206ENST00000553569 CLPBQ9H078 707 aa22.67■■□□□ 1.22
TDP1-206ENST00000553569 CDH19Q9H159 772 aa22.67■■□□□ 1.22
TDP1-206ENST00000553569 CARS2Q9HA77 564 aaKnown RBP22.67■■□□□ 1.22
TDP1-206ENST00000553569 NLGN3Q9NZ94 848 aa22.67■■□□□ 1.22
TDP1-206ENST00000553569 IL17CQ9P0M4 197 aa22.67■■□□□ 1.22
TDP1-206ENST00000553569 NFKBIL1Q9UBC1 381 aaPredicted RBP22.67■■□□□ 1.22
TDP1-206ENST00000553569 DOLKQ9UPQ8 538 aa22.67■■□□□ 1.22
TDP1-206ENST00000553569 CSNK1G3Q9Y6M4 447 aa22.67■■□□□ 1.22
TDP1-206ENST00000553569 SPTBN2O15020 2390 aa22.66■■□□□ 1.22
TDP1-206ENST00000553569 MED19A0JLT2 244 aaPredicted RBP22.66■■□□□ 1.22
TDP1-206ENST00000553569 CTAGE9A4FU28 777 aa22.66■■□□□ 1.22
TDP1-206ENST00000553569 STX7O15400 261 aaKnown RBP22.66■■□□□ 1.22
TDP1-206ENST00000553569 TNFSF14O43557 240 aa22.66■■□□□ 1.22
TDP1-206ENST00000553569 ASMTLO95671 621 aa22.66■■□□□ 1.22
TDP1-206ENST00000553569 GIMD1P0DJR0 217 aa22.66■■□□□ 1.22
TDP1-206ENST00000553569 SPAM1P38567 509 aa22.66■■□□□ 1.22
TDP1-206ENST00000553569 GNPDA1P46926 289 aa22.66■■□□□ 1.22
TDP1-206ENST00000553569 DNAJC3Q13217 504 aa22.66■■□□□ 1.22
TDP1-206ENST00000553569 TAF1AQ15573 450 aaPredicted RBP22.66■■□□□ 1.22
TDP1-206ENST00000553569 TTC27Q6P3X3 843 aa22.66■■□□□ 1.22
TDP1-206ENST00000553569 MARK2Q7KZI7 788 aaKnown RBP22.66■■□□□ 1.22
TDP1-206ENST00000553569 GLRX5Q86SX6 157 aa22.66■■□□□ 1.22
TDP1-206ENST00000553569 FSTL5Q8N475 847 aaPredicted RBP22.66■■□□□ 1.22
TDP1-206ENST00000553569 TRAM1L1Q8N609 369 aa22.66■■□□□ 1.22
TDP1-206ENST00000553569 COX14Q96I36 57 aa22.66■■□□□ 1.22
TDP1-206ENST00000553569 CAPZA3Q96KX2 299 aa22.66■■□□□ 1.22
TDP1-206ENST00000553569 PLEKHG4BQ96PX9 1271 aa22.66■■□□□ 1.22
TDP1-206ENST00000553569 ARNT2Q9HBZ2 717 aa22.66■■□□□ 1.22
TDP1-206ENST00000553569 ARFGAP3Q9NP61 516 aa22.66■■□□□ 1.22
TDP1-206ENST00000553569 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.66■■□□□ 1.22
TDP1-206ENST00000553569 FEZ2Q9UHY8 353 aaPredicted RBP22.66■■□□□ 1.22
TDP1-206ENST00000553569 CNOT6Q9ULM6 557 aaKnown RBP22.66■■□□□ 1.22
TDP1-206ENST00000553569 SUFUQ9UMX1 484 aa22.66■■□□□ 1.22
TDP1-206ENST00000553569 KCTD3Q9Y597 815 aa22.66■■□□□ 1.22
TDP1-206ENST00000553569 OAS3Q9Y6K5 1087 aaKnown RBP22.66■■□□□ 1.22
TDP1-206ENST00000553569 GOLGA6L10A0A0M3HER8 536 aa22.65■■□□□ 1.22
TDP1-206ENST00000553569 C2orf81A6NN90 581 aa22.65■■□□□ 1.22
TDP1-206ENST00000553569 ANXA6P08133 673 aa22.65■■□□□ 1.22
TDP1-206ENST00000553569 FTH1P19P0C7X4 201 aa22.65■■□□□ 1.22
TDP1-206ENST00000553569 TPH1P17752 444 aa22.65■■□□□ 1.22
TDP1-206ENST00000553569 LPOP22079 712 aaPredicted RBP22.65■■□□□ 1.22
TDP1-206ENST00000553569 VPS41P49754 854 aa22.65■■□□□ 1.22
TDP1-206ENST00000553569 BASP1P80723 227 aaKnown RBP22.65■■□□□ 1.22
TDP1-206ENST00000553569 SEMA5AQ13591 1074 aa22.65■■□□□ 1.22
TDP1-206ENST00000553569 SEPT6Q14141 434 aa22.65■■□□□ 1.22
TDP1-206ENST00000553569 ELOCQ15369 112 aa22.65■■□□□ 1.22
TDP1-206ENST00000553569 TRIP13Q15645 432 aaPredicted RBP22.65■■□□□ 1.22
TDP1-206ENST00000553569 FAM151BQ6UXP7 276 aa22.65■■□□□ 1.22
TDP1-206ENST00000553569 PPP1R21Q6ZMI0 780 aa22.65■■□□□ 1.22
TDP1-206ENST00000553569 BRSK1Q8TDC3 778 aa22.65■■□□□ 1.22
TDP1-206ENST00000553569 DUSP23Q9BVJ7 150 aa22.65■■□□□ 1.22
TDP1-206ENST00000553569 TMEM168Q9H0V1 697 aa22.65■■□□□ 1.22
TDP1-206ENST00000553569 KCND1Q9NSA2 647 aa22.65■■□□□ 1.22
TDP1-206ENST00000553569 SLC17A4Q9Y2C5 497 aa22.65■■□□□ 1.22
TDP1-206ENST00000553569 ZNF106Q9H2Y7 1883 aaKnown RBP22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms