RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 SMIM31A0A1B0GVY4 71 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 OR51F1A6NGY5 319 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 FBP2O00757 339 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 CDK14O94921 469 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 VNN2O95498 520 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 ACRP10323 421 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 KCNC1P48547 511 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 SLC11A1P49279 550 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 CLCN4P51793 760 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 ARPP19P56211 112 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 SH3BP2P78314 561 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 FOXM1Q08050 763 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 DUSP4Q13115 394 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 AARS2Q5JTZ9 985 aaKnown RBP12.86□□□□□ -0.35
SHMT2-205ENST00000553474 RNF220Q5VTB9 566 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 SLC8B1Q6J4K2 584 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 OGFOD2Q6N063 350 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 UGT2A3Q6UWM9 527 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 CYHR1Q6ZMK1 362 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 GLT6D1Q7Z4J2 308 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 LDB1Q86U70 411 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-205ENST00000553474 PIM3Q86V86 326 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 SPATA24Q86W54 205 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 CIR1Q86X95 450 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-205ENST00000553474 PTGR2Q8N8N7 351 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-205ENST00000553474 DBF4BQ8NFT6 615 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 OR13C4Q8NGS5 318 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 GPR152Q8TDT2 470 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 LPGAT1Q92604 370 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 USP13Q92995 863 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-205ENST00000553474 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.86□□□□□ -0.35
SHMT2-205ENST00000553474 PBXIP1Q96AQ6 731 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 TDRD1Q9BXT4 1180 aaKnown RBP12.86□□□□□ -0.35
SHMT2-205ENST00000553474 TNFRSF12AQ9NP84 129 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 LRFN2Q9ULH4 789 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 FIS1Q9Y3D6 152 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 CAPN8A6NHC0 703 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 GOLGA8CPA6NN73 597 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 E7ENX8 843 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 H3BNC9 293 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 H7C0S8 307 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 KLK8O60259 260 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 NDUFS3O75489 264 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 SOAT2O75908 522 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 MLYCDO95822 493 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 PABPC4LP0CB38 370 aaKnown RBP12.86□□□□□ -0.35
SHMT2-205ENST00000553474 ZCCHC18P0CG32 403 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 IDO1P14902 403 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 CD1EP15812 388 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 LPOP22079 712 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-205ENST00000553474 GPX3P22352 226 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 SLC7A1P30825 629 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 PPP3CCP48454 512 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 FPGSQ05932 587 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 GALNT3Q14435 633 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 GPNMBQ14956 572 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 LIN52Q52LA3 116 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 HECTD3Q5T447 861 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 SLC30A9Q6PML9 568 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 NPAS4Q8IUM7 802 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 MIER2Q8N344 545 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 GALNT15Q8N3T1 639 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 SEPT8Q92599 483 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 UHRF1Q96T88 793 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-205ENST00000553474 TRIM15Q9C019 465 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 NACA2Q9H009 215 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 CRISPLD1Q9H336 500 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 MUC13Q9H3R2 512 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 AP4S1Q9Y587 144 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 BACE2Q9Y5Z0 518 aa12.86□□□□□ -0.35
SHMT2-205ENST00000553474 OAS3Q9Y6K5 1087 aaKnown RBP12.86□□□□□ -0.35
SHMT2-205ENST00000553474 ZFP37Q9Y6Q3 630 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-205ENST00000553474 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-205ENST00000553474 A0A0D9SEW6 157 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 TCRBV3S1A0A5B6 114 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 DYTNA2CJ06 578 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 TYW5A2RUC4 315 aaKnown RBP12.85□□□□□ -0.35
SHMT2-205ENST00000553474 DNAJA2O60884 412 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 RHOBTB1O94844 696 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 TNFAIP8O95379 198 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 PARNO95453 639 aaKnown RBP12.85□□□□□ -0.35
SHMT2-205ENST00000553474 LATS1O95835 1130 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 SLC4A1P02730 911 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 GALTP07902 379 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 GFAPP14136 432 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 LBPP18428 481 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 ATF6P18850 670 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 SLC6A4P31645 630 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 RFC2P35250 354 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 KCNQ1P51787 676 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 CREB5Q02930 508 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 ZNF177Q13360 481 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-205ENST00000553474 SEMA3AQ14563 771 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 PPP1R3AQ16821 1122 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 TCTN1Q2MV58 587 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 MAP7D1Q3KQU3 841 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 RTP2Q5QGT7 225 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 ANKS6Q68DC2 871 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 CLEC6AQ6EIG7 209 aa12.85□□□□□ -0.35
SHMT2-205ENST00000553474 SPATA19Q7Z5L4 167 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms