RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 LMAN2Q12907 356 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 CYLC2Q14093 348 aaPredicted RBP13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 AARS2Q5JTZ9 985 aaKnown RBP13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 TLDC1Q6P9B6 456 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 MYLK4Q86YV6 388 aaPredicted RBP13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 CAMK1DQ8IU85 385 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 NKAPQ8N5F7 415 aaKnown RBP13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 FIBINQ8TAL6 211 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 STAG3L4Q8TBR4 150 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 MARK4Q96L34 752 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 ANKRD27Q96NW4 1050 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 GCNAQ96QF7 691 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 GPR21Q99679 349 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 SLC46A2Q9BY10 475 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 GPR63Q9BZJ6 419 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 ZBTB26Q9HCK0 441 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 WBP1LQ9NX94 342 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 PLK2Q9NYY3 685 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 CLEC4EQ9ULY5 219 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 PKP3Q9Y446 797 aa13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 COPG1Q9Y678 874 aaKnown RBP13.96□□□□□ -0.18
RAB3IP-216ENST00000552199 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 ZBBXA8MT70 800 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 LEFTY2O00292 366 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 OR1I1O60431 355 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 KERAO60938 352 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 TBX10O75333 385 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 VPS26AO75436 327 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 CTPS1P17812 591 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 PFKLP17858 780 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 C1QTNF8P60827 252 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 RPL26P61254 145 aaKnown RBP13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 SLC34A1Q06495 639 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 ZRSR2Q15696 482 aaKnown RBP13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 PFKFB4Q16877 469 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 PPM1LQ5SGD2 360 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 TPGS1Q6ZTW0 290 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 CHSY3Q70JA7 882 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 LYSMD3Q7Z3D4 306 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 PELI3Q8N2H9 469 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 SHKBP1Q8TBC3 707 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 CLP1Q92989 425 aaKnown RBP13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 ARMC5Q96C12 935 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 EID2BQ96D98 161 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 ASB2Q96Q27 587 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 CORO1BQ9BR76 489 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 GALPQ9UBC7 116 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 EVLQ9UI08 416 aaPredicted RBP13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 CDH22Q9UJ99 828 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 LRRC42Q9Y546 428 aa13.95□□□□□ -0.18
RAB3IP-216ENST00000552199 HTRA2O43464 458 aaPredicted RBP13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 ALPIP09923 528 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 TSPAN8P19075 237 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 CD70P32970 193 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 HMGCLP35914 325 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 PTGER3P43115 390 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 CACNG1Q06432 222 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 BCL2L1Q07817 233 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 TBL3Q12788 808 aaKnown RBP13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 CTSL3PQ5NE16 218 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 FBXO46Q6PJ61 603 aaPredicted RBP13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 TAS2R42Q7RTR8 314 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 OR6K2Q8NGY2 324 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 DTX3LQ8TDB6 740 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 SLC30A3Q99726 388 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 ASAH2Q9NR71 780 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 ABCB8Q9NUT2 735 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 IKZF3Q9UKT9 509 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 RNF112Q9ULX5 631 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 FNDC3AQ9Y2H6 1198 aaKnown RBP13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 COMMD10Q9Y6G5 202 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 HELZP42694 1942 aaKnown RBP13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 CCDC189A1A4V9 331 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 AIM2O14862 343 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 NIPSNAP2O75323 286 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 SIX3O95343 332 aaPredicted RBP13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 GFAPP14136 432 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 MAPK8P45983 427 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 ADARP55265 1226 aaKnown RBP13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 CDH13P55290 713 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 PLEKHG6Q3KR16 790 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 NECAB2Q7Z6G3 386 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 METTL3Q86U44 580 aaKnown RBP13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 CLYBLQ8N0X4 340 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 STK40Q8N2I9 435 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 FBXW8Q8N3Y1 598 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 KYQ8NBH2 561 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 SLC22A17Q8WUG5 538 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 LMLNQ96KR4 655 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 LBHD1Q9BQE6 289 aaPredicted RBP13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 MRGBPQ9NV56 204 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 TRMT6Q9UJA5 497 aaKnown RBP13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 INTS6Q9UL03 887 aaKnown RBP13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 SLC30A1Q9Y6M5 507 aa13.94□□□□□ -0.18
RAB3IP-216ENST00000552199 LRRC14BA6NHZ5 514 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 SUPT3HB4E1H0 165 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 CDC7O00311 574 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 CCL16O15467 120 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 SOCS5O75159 536 aa13.93□□□□□ -0.18
RAB3IP-216ENST00000552199 SUPT3HO75486 399 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms