RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 ETV3P41162 512 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 GPR1P46091 355 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 RENBPP51606 427 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 CCL11P51671 97 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 AIF1P55008 147 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 HDAC4P56524 1084 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 STX17P56962 302 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 CHRNA6Q15825 494 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 CNGA3Q16281 694 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 UGT8Q16880 541 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 RAB6CQ53S08 254 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 ZRANB3Q5FWF4 1079 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 IYDQ6PHW0 289 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 DOK6Q6PKX4 331 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 ADAMTSL4Q6UY14 1074 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 CREBRFQ8IUR6 639 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 GPT2Q8TD30 523 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 FAM172AQ8WUF8 416 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 PTCD2Q8WV60 388 aaKnown RBP15.18■□□□□ 0.02
CACNB3-220ENST00000551716 TCTN2Q96GX1 697 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 C9orf72Q96LT7 481 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 HERPUD2Q9BSE4 406 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 CINPQ9BW66 212 aaPredicted RBP15.18■□□□□ 0.02
CACNB3-220ENST00000551716 RAB6CQ9H0N0 254 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 RCOR3Q9P2K3 495 aaPredicted RBP15.18■□□□□ 0.02
CACNB3-220ENST00000551716 PLEKHM1Q9Y4G2 1056 aa15.18■□□□□ 0.02
CACNB3-220ENST00000551716 KIR2DS5A0A0G2JLQ3 304 aa15.17■□□□□ 0.02
CACNB3-220ENST00000551716 A0A0G2JNG1 304 aa15.17■□□□□ 0.02
CACNB3-220ENST00000551716 KIR2DS3K7RE56 304 aa15.17■□□□□ 0.02
CACNB3-220ENST00000551716 CREB3O43889 395 aa15.17■□□□□ 0.02
CACNB3-220ENST00000551716 MAPK9P45984 424 aa15.17■□□□□ 0.02
CACNB3-220ENST00000551716 SCNN1BP51168 640 aa15.17■□□□□ 0.02
CACNB3-220ENST00000551716 KIR2DS5Q14953 304 aa15.17■□□□□ 0.02
CACNB3-220ENST00000551716 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.17■□□□□ 0.02
CACNB3-220ENST00000551716 DENND2CQ68D51 928 aa15.17■□□□□ 0.02
CACNB3-220ENST00000551716 NLRP8Q86W28 1048 aa15.17■□□□□ 0.02
CACNB3-220ENST00000551716 TP53INP2Q8IXH6 220 aa15.17■□□□□ 0.02
CACNB3-220ENST00000551716 PNPLA2Q96AD5 504 aa15.17■□□□□ 0.02
CACNB3-220ENST00000551716 OR6C1Q96RD1 312 aa15.17■□□□□ 0.02
CACNB3-220ENST00000551716 ING2Q9H160 280 aa15.17■□□□□ 0.02
CACNB3-220ENST00000551716 ACTL8Q9H568 366 aa15.17■□□□□ 0.02
CACNB3-220ENST00000551716 LRRC19Q9H756 370 aa15.17■□□□□ 0.02
CACNB3-220ENST00000551716 LHX9Q9NQ69 397 aa15.17■□□□□ 0.02
CACNB3-220ENST00000551716 CNOT8Q9UFF9 292 aaKnown RBP15.17■□□□□ 0.02
CACNB3-220ENST00000551716 LNPEPQ9UIQ6 1025 aa15.17■□□□□ 0.02
CACNB3-220ENST00000551716 CSMD1Q96PZ7 3565 aa15.17■□□□□ 0.02
CACNB3-220ENST00000551716 MN1Q10571 1320 aaPredicted RBP15.17■□□□□ 0.02
CACNB3-220ENST00000551716 ANKRD36A6QL64 1941 aa15.16■□□□□ 0.02
CACNB3-220ENST00000551716 CBX6O95503 412 aa15.16■□□□□ 0.02
CACNB3-220ENST00000551716 C9P02748 559 aa15.16■□□□□ 0.02
CACNB3-220ENST00000551716 FGF5P12034 268 aa15.16■□□□□ 0.02
CACNB3-220ENST00000551716 PRKCSHP14314 528 aaPredicted RBP15.16■□□□□ 0.02
CACNB3-220ENST00000551716 RGRP47804 291 aa15.16■□□□□ 0.02
CACNB3-220ENST00000551716 RPS15P62841 145 aaKnown RBP15.16■□□□□ 0.02
CACNB3-220ENST00000551716 TAF3Q5VWG9 929 aa15.16■□□□□ 0.02
CACNB3-220ENST00000551716 NAA35Q5VZE5 725 aa15.16■□□□□ 0.02
CACNB3-220ENST00000551716 Q6ZVL8 140 aa15.16■□□□□ 0.02
CACNB3-220ENST00000551716 HSD11B1LQ7Z5J1 315 aa15.16■□□□□ 0.02
CACNB3-220ENST00000551716 SYVN1Q86TM6 617 aa15.16■□□□□ 0.02
CACNB3-220ENST00000551716 RHOT1Q8IXI2 618 aa15.16■□□□□ 0.02
CACNB3-220ENST00000551716 FCRL4Q96PJ5 515 aa15.16■□□□□ 0.02
CACNB3-220ENST00000551716 UCK1Q9HA47 277 aa15.16■□□□□ 0.02
CACNB3-220ENST00000551716 SIX2Q9NPC8 291 aa15.16■□□□□ 0.02
CACNB3-220ENST00000551716 ZNHIT2Q9UHR6 403 aa15.16■□□□□ 0.02
CACNB3-220ENST00000551716 TMEM98Q9Y2Y6 226 aa15.16■□□□□ 0.02
CACNB3-220ENST00000551716 LILRA5A6NI73 299 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 HTRA2O43464 458 aaPredicted RBP15.15■□□□□ 0.02
CACNB3-220ENST00000551716 SOCS5O75159 536 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 SPAG6O75602 509 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 PNMA6AP0CW24 399 aaPredicted RBP15.15■□□□□ 0.02
CACNB3-220ENST00000551716 KRT3P12035 628 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 MMP8P22894 467 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 PAPOLAP51003 745 aaKnown RBP15.15■□□□□ 0.02
CACNB3-220ENST00000551716 NOMO3P69849 1222 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 ELOAQ14241 798 aaKnown RBP15.15■□□□□ 0.02
CACNB3-220ENST00000551716 BPHLQ86WA6 291 aaPredicted RBP15.15■□□□□ 0.02
CACNB3-220ENST00000551716 PPP1R3BQ86XI6 285 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 ZNF677Q86XU0 584 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 PYROXD2Q8N2H3 581 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 CT55Q8WUE5 264 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 MARVELD3Q96A59 401 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 SCRN2Q96FV2 425 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 PSKH2Q96QS6 385 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 BRD8Q9H0E9 1235 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 TMEM63CQ9P1W3 806 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 CPNE7Q9UBL6 633 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 ENTPD4Q9Y227 616 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 ZDHHC9Q9Y397 364 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 SHANK1Q9Y566 2161 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 OTOGQ6ZRI0 2925 aa15.15■□□□□ 0.02
CACNB3-220ENST00000551716 CEACAM4O75871 244 aa15.14■□□□□ 0.01
CACNB3-220ENST00000551716 PTPN4P29074 926 aa15.14■□□□□ 0.01
CACNB3-220ENST00000551716 NR6A1Q15406 480 aa15.14■□□□□ 0.01
CACNB3-220ENST00000551716 TMCO4Q5TGY1 634 aa15.14■□□□□ 0.01
CACNB3-220ENST00000551716 SCYL2Q6P3W7 929 aa15.14■□□□□ 0.01
CACNB3-220ENST00000551716 MARK2Q7KZI7 788 aaKnown RBP15.14■□□□□ 0.01
CACNB3-220ENST00000551716 NDUFAF2Q8N183 169 aa15.14■□□□□ 0.01
CACNB3-220ENST00000551716 Q8NA96 180 aa15.14■□□□□ 0.01
CACNB3-220ENST00000551716 PDCD6IPQ8WUM4 868 aaKnown RBP15.14■□□□□ 0.01
CACNB3-220ENST00000551716 AP2M1Q96CW1 435 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms