RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 PKP3Q9Y446 797 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 OR1A2Q9Y585 309 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 GPR179Q6PRD1 2367 aa12.98□□□□□ -0.33
RAB5C-206ENST00000550406 SDR42E2A6NKP2 422 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 H7C0S8 307 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 SMAPO00193 183 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 AP3B1O00203 1094 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 TLR4O00206 839 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 VILLO15195 856 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 UGT1A9O60656 530 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 PPFIA2O75334 1257 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 PRSS56P0CW18 603 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 THEGLP0DJG4 465 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 GNSP15586 552 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 UGT1A6P19224 532 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 UGT1A1P22309 533 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 UGT1A4P22310 534 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 TEAD1P28347 426 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 UGT1A3P35503 534 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 UGT1A5P35504 534 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 SPAM1P38567 509 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 GPR1P46091 355 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 AFF3P51826 1226 aaKnown RBP12.97□□□□□ -0.33
RAB5C-206ENST00000550406 PLTPP55058 493 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 IRX4P78413 519 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 PDE1BQ01064 536 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 ATP13A5Q4VNC0 1218 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 KCTD16Q68DU8 428 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 TCEAL6Q6IPX3 200 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 FAM151BQ6UXP7 276 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 ADAMTSL4Q6UY14 1074 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 TRAM1L1Q8N609 369 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 PPHLN1Q8NEY8 458 aaKnown RBP12.97□□□□□ -0.33
RAB5C-206ENST00000550406 FBXO25Q8TCJ0 367 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 DTX3LQ8TDB6 740 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 TCEAL3Q969E4 200 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 MFSD3Q96ES6 412 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 KLHDC7BQ96G42 594 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 COX14Q96I36 57 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 TBATAQ96M53 351 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 TEX101Q9BY14 249 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 UGT1A7Q9HAW7 530 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 UGT1A10Q9HAW8 530 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 UGT1A8Q9HAW9 530 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 PLAC1Q9HBJ0 212 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 MRM3Q9HC36 420 aaKnown RBP12.97□□□□□ -0.33
RAB5C-206ENST00000550406 PARD6AQ9NPB6 346 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 RRAGDQ9NQL2 400 aaPredicted RBP12.97□□□□□ -0.33
RAB5C-206ENST00000550406 GDF3Q9NR23 364 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 RAD18Q9NS91 495 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 SUSD2Q9UGT4 822 aa12.97□□□□□ -0.33
RAB5C-206ENST00000550406 FNDC3AQ9Y2H6 1198 aaKnown RBP12.97□□□□□ -0.33
RAB5C-206ENST00000550406 OAS3Q9Y6K5 1087 aaKnown RBP12.97□□□□□ -0.33
RAB5C-206ENST00000550406 KNL1Q8NG31 2342 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 ZFC3H1O60293 1989 aaKnown RBP12.96□□□□□ -0.33
RAB5C-206ENST00000550406 GLYATL1P3A0A0U1RQE8 302 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 CCDC162PA2VCL2 907 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 OR51F1A6NGY5 319 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 A6NNZ2 444 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 AGAP14A8MT82 685 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 PRR5-ARHGAP8B1AHC4 643 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 E7ESA3 106 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 FUCA1P04066 466 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 HOXC4P09017 264 aaPredicted RBP12.96□□□□□ -0.33
RAB5C-206ENST00000550406 RHOXF2BP0C7M4 288 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 TSHRP16473 764 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 ARNTP27540 789 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 ECHS1P30084 290 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 DPP6P42658 865 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 CTSKP43235 329 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 RABIFP47224 123 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 CDKN1CP49918 316 aaPredicted RBP12.96□□□□□ -0.33
RAB5C-206ENST00000550406 NXPH1P58417 271 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 YPEL5P62699 121 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 CDK3Q00526 305 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 SPEM2Q0P670 501 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 FZD2Q14332 565 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 KIF19Q2TAC6 998 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 BBS9Q3SYG4 887 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 TRIM61Q5EBN2 209 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 HP1BP3Q5SSJ5 553 aaPredicted RBP12.96□□□□□ -0.33
RAB5C-206ENST00000550406 RAET1GQ6H3X3 334 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 PTAR1Q7Z6K3 402 aaPredicted RBP12.96□□□□□ -0.33
RAB5C-206ENST00000550406 TRIM74Q86UV6 250 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 IQCHQ86VS3 1027 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 HEATR4Q86WZ0 1026 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 PNPLA1Q8N8W4 532 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 CEP76Q8TAP6 659 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 PTCD2Q8WV60 388 aaKnown RBP12.96□□□□□ -0.33
RAB5C-206ENST00000550406 HDAC10Q969S8 669 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 RHOXF2Q9BQY4 288 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 SPATA16Q9BXB7 569 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 CDH19Q9H159 772 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 FAM96AQ9H5X1 160 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 SLC6A14Q9UN76 642 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 ANKRD6Q9Y2G4 727 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 SNX11Q9Y5W9 270 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 TEX264Q9Y6I9 313 aa12.96□□□□□ -0.33
RAB5C-206ENST00000550406 OTOGLQ3ZCN5 2332 aa12.96□□□□□ -0.34
RAB5C-206ENST00000550406 BPTFQ12830 3046 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms