RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 ZNF398Q8TD17 642 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 DCAKDQ8WVC6 231 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 BTN2A2Q8WVV5 523 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.65□□□□□ -1.18
RNF41-208ENST00000550379 ZNF669Q96BR6 464 aaPredicted RBP7.65□□□□□ -1.18
RNF41-208ENST00000550379 SCARF2Q96GP6 870 aaPredicted RBP7.65□□□□□ -1.18
RNF41-208ENST00000550379 COX14Q96I36 57 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 ZNF514Q96K75 400 aaPredicted RBP7.65□□□□□ -1.18
RNF41-208ENST00000550379 DNAJC1Q96KC8 554 aaKnown RBP7.65□□□□□ -1.18
RNF41-208ENST00000550379 KLF6Q99612 283 aaPredicted RBP7.65□□□□□ -1.18
RNF41-208ENST00000550379 GPR22Q99680 433 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 OMDQ99983 421 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 FOXQ1Q9C009 403 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 DUSP15Q9H1R2 295 aaPredicted RBP7.65□□□□□ -1.18
RNF41-208ENST00000550379 ACBD3Q9H3P7 528 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 POPDC3Q9HBV1 291 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 SSU72Q9NP77 194 aaKnown RBP7.65□□□□□ -1.18
RNF41-208ENST00000550379 MED4Q9NPJ6 270 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 GPR27Q9NS67 375 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 MKS1Q9NXB0 559 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 FAM53CQ9NYF3 392 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 ZFATQ9P243 1243 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 SERGEFQ9UGK8 458 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 FBXO5Q9UKT4 447 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 PLXNB3Q9ULL4 1909 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 PCDHB1Q9Y5F3 818 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 HS3ST3A1Q9Y663 406 aa7.65□□□□□ -1.18
RNF41-208ENST00000550379 DNMT3AQ9Y6K1 912 aaPredicted RBP7.65□□□□□ -1.18
RNF41-208ENST00000550379 IGHV1OR15-9A0A0B4J2B8 117 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 EXOC1LA0A1B0GW35 172 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 A0A1W2PP55 124 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 TCRBV21S2A2A0A5A6 115 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 CCDC162PA2VCL2 907 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 TMEM221A6NGB7 291 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 F5H423 210 aaPredicted RBP7.64□□□□□ -1.19
RNF41-208ENST00000550379 M0R296 226 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 RASGRF2O14827 1237 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 VEGFDO43915 354 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 BNIP3LO60238 219 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 OPA1O60313 960 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 KCNJ13O60928 360 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 BANF1O75531 89 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 KRT37O76014 449 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 KRT38O76015 456 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 AP2A2O94973 939 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 ACSL3O95573 720 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 SOD1P00441 154 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 GOT2P00505 430 aaKnown RBP7.64□□□□□ -1.19
RNF41-208ENST00000550379 AHSGP02765 367 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 ESR1P03372 595 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 COL6A2P12110 1019 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 C6P13671 934 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 GABRB3P28472 473 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 ATP5DP30049 168 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 CD6P30203 668 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 SPRP35270 261 aaPredicted RBP7.64□□□□□ -1.19
RNF41-208ENST00000550379 SKIV2L2P42285 1042 aaKnown RBP7.64□□□□□ -1.19
RNF41-208ENST00000550379 NSG1P42857 185 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 METAP1P53582 386 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 YPEL5P62699 121 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 FAM193AP78312 1265 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 ZNF844Q08AG5 666 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 THOC5Q13769 683 aaKnown RBP7.64□□□□□ -1.19
RNF41-208ENST00000550379 ZKSCAN8Q15776 578 aaPredicted RBP7.64□□□□□ -1.19
RNF41-208ENST00000550379 HSP90AA5PQ58FG0 334 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 LDLRAP1Q5SW96 308 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 FAM182AQ5T1J6 154 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 AGBL2Q5U5Z8 902 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.64□□□□□ -1.19
RNF41-208ENST00000550379 MACC1Q6ZN28 852 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 Q6ZVL8 140 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 HSD11B1LQ7Z5J1 315 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 IQCHQ86VS3 1027 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 WDR5BQ86VZ2 330 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 DCP2Q8IU60 420 aaKnown RBP7.64□□□□□ -1.19
RNF41-208ENST00000550379 RBFAQ8N0V3 343 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 NXPE1Q8N323 547 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 FBXL6Q8N531 539 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.64□□□□□ -1.19
RNF41-208ENST00000550379 TMEM145Q8NBT3 493 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 CXorf40AQ8TE69 158 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 MZB1Q8WU39 189 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 UBLCP1Q8WVY7 318 aaPredicted RBP7.64□□□□□ -1.19
RNF41-208ENST00000550379 DNASE2BQ8WZ79 361 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 LPGAT1Q92604 370 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 ALKBH8Q96BT7 664 aaKnown RBP7.64□□□□□ -1.19
RNF41-208ENST00000550379 PDLIM5Q96HC4 596 aaKnown RBP7.64□□□□□ -1.19
RNF41-208ENST00000550379 LINC00615Q96LM1 132 aaPredicted RBP7.64□□□□□ -1.19
RNF41-208ENST00000550379 ZIM3Q96PE6 472 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 PAFAH2Q99487 392 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 RBBP8Q99708 897 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 TEX101Q9BY14 249 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 SLC17A9Q9BYT1 436 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 STMN4Q9H169 189 aaPredicted RBP7.64□□□□□ -1.19
RNF41-208ENST00000550379 ABCG8Q9H221 673 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 P2RY12Q9H244 342 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 RMI1Q9H9A7 625 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 VPS37BQ9H9H4 285 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 SMYD2Q9NRG4 433 aa7.64□□□□□ -1.19
RNF41-208ENST00000550379 CATSPERZQ9NTU4 200 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms