RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 TPM3P06753 285 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 ERCC2P18074 760 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 KELP23276 732 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 CD1CP29017 333 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 SERPINA4P29622 427 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 RGRP47804 291 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 HCAR3P49019 387 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 PAPOLAP51003 745 aaKnown RBP12.17□□□□□ -0.46
DDX54-206ENST00000549271 ZNF135P52742 658 aaPredicted RBP12.17□□□□□ -0.46
DDX54-206ENST00000549271 RAB15P59190 212 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 POLR2LP62875 67 aaKnown RBP12.17□□□□□ -0.46
DDX54-206ENST00000549271 ABHD18Q0P651 414 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 RALGDSQ12967 914 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 DPYSQ14117 519 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 CCDC122Q5T0U0 273 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 CFAP58Q5T655 872 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 DCAF12Q5T6F0 453 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 TXNRD3NBQ6F5E7 133 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 RFX8Q6ZV50 586 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 VSTM4Q8IW00 320 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 ARHGAP12Q8IWW6 846 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 UNC5BQ8IZJ1 945 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 NIPA2Q8N8Q9 360 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 BMPERQ8N8U9 685 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 TSEN2Q8NCE0 465 aaKnown RBP12.17□□□□□ -0.46
DDX54-206ENST00000549271 RNF214Q8ND24 703 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 OR4D9Q8NGE8 314 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 OR56A4Q8NGH8 313 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 STARD8Q92502 1023 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 CELF6Q96J87 481 aaKnown RBP12.17□□□□□ -0.46
DDX54-206ENST00000549271 DNAJC7Q99615 494 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 NUP85Q9BW27 656 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 SLC39A8Q9C0K1 460 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 OCIAD1Q9NX40 245 aa12.17□□□□□ -0.46
DDX54-206ENST00000549271 CWC15Q9P013 229 aaKnown RBP12.17□□□□□ -0.46
DDX54-206ENST00000549271 TMEM202A6NGA9 273 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 CACNB4O00305 520 aaPredicted RBP12.16□□□□□ -0.46
DDX54-206ENST00000549271 TRAFD1O14545 582 aaPredicted RBP12.16□□□□□ -0.46
DDX54-206ENST00000549271 RECQL5O94762 991 aaPredicted RBP12.16□□□□□ -0.46
DDX54-206ENST00000549271 PCCBP05166 539 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 THRAP10827 490 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 TCN2P20062 427 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 ALDH4A1P30038 563 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 IL10RBQ08334 325 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 SQSTM1Q13501 440 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 PIGHQ14442 188 aaPredicted RBP12.16□□□□□ -0.46
DDX54-206ENST00000549271 BOLA3Q53S33 107 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 PPP6R3Q5H9R7 873 aaPredicted RBP12.16□□□□□ -0.46
DDX54-206ENST00000549271 ANKS6Q68DC2 871 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 LIPIQ6XZB0 460 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 DPPA4Q7L190 304 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 TIPARPQ7Z3E1 657 aaKnown RBP12.16□□□□□ -0.46
DDX54-206ENST00000549271 TP53INP2Q8IXH6 220 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 PLA2G15Q8NCC3 412 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 OR8K1Q8NGG5 319 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 OR1E3Q8WZA6 343 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 FUBP1Q96AE4 644 aaKnown RBP12.16□□□□□ -0.46
DDX54-206ENST00000549271 RTP4Q96DX8 246 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 PSKH2Q96QS6 385 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 TMEM168Q9H0V1 697 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 DPEP2Q9H4A9 486 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 FGF22Q9HCT0 170 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 MAP4K5Q9Y4K4 846 aa12.16□□□□□ -0.46
DDX54-206ENST00000549271 HIVEP1P15822 2718 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 A0A1W2PQ67 120 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 PDE2AO00408 941 aaPredicted RBP12.15□□□□□ -0.46
DDX54-206ENST00000549271 PALMO75781 387 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 PDGFAP04085 211 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 ELFN1P0C7U0 828 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 RARAP10276 462 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 GM2AP17900 193 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 CSTF2P33240 577 aaKnown RBP eCLIP12.15□□□□□ -0.46
DDX54-206ENST00000549271 MAZP56270 477 aaKnown RBP12.15□□□□□ -0.46
DDX54-206ENST00000549271 AP1S1P61966 158 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 BCL2L1Q07817 233 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 DPYSL2Q16555 572 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 TSR1Q2NL82 804 aaKnown RBP12.15□□□□□ -0.46
DDX54-206ENST00000549271 SMTNL2Q2TAL5 461 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 C16orf46Q6P387 395 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 ARHGAP36Q6ZRI8 547 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 POLNQ7Z5Q5 900 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 CPNE8Q86YQ8 564 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 NPWQ8N729 165 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 CCL4L1Q8NHW4 92 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 KIAA1524Q8TCG1 905 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 ZNF599Q96NL3 588 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 TEFMQ96QE5 360 aaKnown RBP12.15□□□□□ -0.46
DDX54-206ENST00000549271 CHP1Q99653 195 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 PACSIN1Q9BY11 444 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 CASS4Q9NQ75 786 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 ETNK2Q9NVF9 386 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 KCTD5Q9NXV2 234 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 IP6K2Q9UHH9 426 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 ANAPC7Q9UJX3 599 aa12.15□□□□□ -0.46
DDX54-206ENST00000549271 TMEM184BQ9Y519 407 aaPredicted RBP12.15□□□□□ -0.46
DDX54-206ENST00000549271 CSMD2Q7Z408 3487 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 SSU72P8A0A1W2PR75 194 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 RHPN2P1A8MT19 583 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 ZW10O43264 779 aa12.14□□□□□ -0.47
DDX54-206ENST00000549271 DAPK3O43293 454 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms