RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 CES1P23141 567 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 SHMT2P34897 504 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 ADCYAP1R1P41586 468 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 LEPRP48357 1165 aaKnown RBP13.7□□□□□ -0.22
HDAC7-228ENST00000548938 HERVK_113P63132 956 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 ITGADQ13349 1161 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 GRB14Q14449 540 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 LDLRAP1Q5SW96 308 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 OTUD3Q5T2D3 398 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-228ENST00000548938 PM20D1Q6GTS8 502 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 DPP9Q86TI2 863 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 IGFN1Q86VF2 1251 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 PTGR2Q8N8N7 351 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-228ENST00000548938 SGCDQ92629 289 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 TUBGCP3Q96CW5 907 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 TSPAN17Q96FV3 270 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 GLT1D1Q96MS3 346 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 NSUN5Q96P11 429 aaKnown RBP13.7□□□□□ -0.22
HDAC7-228ENST00000548938 KCTD14Q9BQ13 255 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-228ENST00000548938 ERVK-6Q9BXR3 956 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 TUBB1Q9H4B7 451 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 NANOGQ9H9S0 305 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 ENTPD7Q9NQZ7 604 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 INTS10Q9NVR2 710 aaKnown RBP13.7□□□□□ -0.22
HDAC7-228ENST00000548938 SLC30A1Q9Y6M5 507 aa13.7□□□□□ -0.22
HDAC7-228ENST00000548938 H0Y858 1186 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 MAFKO60675 156 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 SEC14L2O76054 403 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 MYL3P08590 195 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 HGFP14210 728 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 CCNCP24863 283 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 TMBIM6P55061 237 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 LIPEQ05469 1076 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 BFSP2Q13515 415 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 NFYCQ13952 458 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 SLC14A2Q15849 920 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 FAM110CQ1W6H9 321 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 FUT11Q495W5 492 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 RANBP10Q6VN20 620 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 BHLHA9Q7RTU4 235 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 ZNF467Q7Z7K2 595 aaPredicted RBP13.69□□□□□ -0.22
HDAC7-228ENST00000548938 CCDC117Q8IWD4 279 aaPredicted RBP13.69□□□□□ -0.22
HDAC7-228ENST00000548938 RYBPQ8N488 228 aaPredicted RBP13.69□□□□□ -0.22
HDAC7-228ENST00000548938 RNF34Q969K3 372 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 TMEM74Q96NL1 305 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 CSF3RQ99062 836 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 SLC52A3Q9NQ40 469 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 C8orf4Q9NR00 106 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 TLR9Q9NR96 1032 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 SDR39U1Q9NRG7 319 aaPredicted RBP13.69□□□□□ -0.22
HDAC7-228ENST00000548938 RIC8BQ9NVN3 520 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 POLG2Q9UHN1 485 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 VWA7Q9Y334 891 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.69□□□□□ -0.22
HDAC7-228ENST00000548938 RBM47A0AV96 593 aaKnown RBP13.69□□□□□ -0.22
HDAC7-228ENST00000548938 ASPDHA6ND91 283 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 KPNA6O60684 536 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 CLPXO76031 633 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 LINC00032P0C843 101 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 MBL2P11226 248 aaPredicted RBP13.69□□□□□ -0.22
HDAC7-228ENST00000548938 DIO3P55073 304 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 HUNKP57058 714 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 RPS6KA2Q15349 733 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 XAF1Q6GPH4 301 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 TMEM214Q6NUQ4 689 aaKnown RBP13.69□□□□□ -0.22
HDAC7-228ENST00000548938 TOP6BLQ8N6T0 577 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 CNDP2Q96KP4 475 aaKnown RBP13.69□□□□□ -0.22
HDAC7-228ENST00000548938 C1orf50Q9BV19 199 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 PRKD2Q9BZL6 878 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 LHPPQ9H008 270 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 CCDC68Q9H2F9 335 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 PIF1Q9H611 641 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 CNGB3Q9NQW8 809 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 NDFIP2Q9NV92 336 aa13.69□□□□□ -0.22
HDAC7-228ENST00000548938 POLR3BQ9NW08 1133 aaPredicted RBP13.69□□□□□ -0.22
HDAC7-228ENST00000548938 RBM22Q9NW64 420 aaKnown RBP eCLIP13.69□□□□□ -0.224e-7■■■■■ 34.8
HDAC7-228ENST00000548938 OAS3Q9Y6K5 1087 aaKnown RBP13.69□□□□□ -0.22
HDAC7-228ENST00000548938 AZIN1O14977 448 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 SYNCRIPO60506 623 aaKnown RBP13.68□□□□□ -0.22
HDAC7-228ENST00000548938 SLC4A1P02730 911 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 ALBP02768 609 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 BLOC1S3Q6QNY0 202 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 DNAJC14Q6Y2X3 702 aaPredicted RBP13.68□□□□□ -0.22
HDAC7-228ENST00000548938 BTLAQ7Z6A9 289 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 ITIH5Q86UX2 942 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 TBC1D21Q8IYX1 336 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 DCP1BQ8IZD4 617 aaKnown RBP13.68□□□□□ -0.22
HDAC7-228ENST00000548938 PPTC7Q8NI37 304 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 PNPT1Q8TCS8 783 aaKnown RBP13.68□□□□□ -0.22
HDAC7-228ENST00000548938 ERLEC1Q96DZ1 483 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 TEX37Q96LM6 180 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 YTHDF1Q9BYJ9 559 aaKnown RBP13.68□□□□□ -0.22
HDAC7-228ENST00000548938 TRIM54Q9BYV2 358 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 PLXNB2O15031 1838 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 A0A1B0GTL3 188 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 WISP3O95389 354 aaPredicted RBP13.68□□□□□ -0.22
HDAC7-228ENST00000548938 MATN4O95460 622 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 ESRRBO95718 433 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 WNT3AP56704 352 aa13.68□□□□□ -0.22
HDAC7-228ENST00000548938 ZNF33AQ06730 810 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms