RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 EPHB1P54762 984 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 PTSQ03393 145 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 DPYSQ14117 519 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 CLPPQ16740 277 aaPredicted RBP11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 ANO6Q4KMQ2 910 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 MARC1Q5VT66 337 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 LRRC66Q68CR7 880 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 TMCO3Q6UWJ1 677 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 USP45Q70EL2 814 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 TECPR1Q7Z6L1 1165 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 GALNT13Q8IUC8 556 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 NLGN4XQ8N0W4 816 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 NLGN4YQ8NFZ3 816 aaPredicted RBP11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 OR10G6Q8NH81 332 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 C9orf43Q8TAL5 461 aaPredicted RBP11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 LRRN4Q8WUT4 740 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 PIH1D2Q8WWB5 315 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 KIAA1143Q96AT1 154 aaPredicted RBP11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 ZNF653Q96CK0 615 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 ABHD17AQ96GS6 310 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 ZNF599Q96NL3 588 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 RIOK2Q9BVS4 552 aaKnown RBP11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 ASPSCR1Q9BZE9 553 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 KCTD5Q9NXV2 234 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 KCNK6Q9Y257 313 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 TTLL3Q9Y4R7 772 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 MRPS18BQ9Y676 258 aaKnown RBP11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 A0A1W2PQ67 120 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 B4E171 279 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 EIF3CLB5ME19 914 aaKnown RBP11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 PSMD11O00231 422 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 NR1D1P20393 614 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 OAS2P29728 719 aaKnown RBP11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 TSPAN7P41732 249 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 HCAR3P49019 387 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 GPLD1P80108 840 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 MC2RQ01718 297 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 HHEXQ03014 270 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 PEX6Q13608 980 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 FAM182AQ5T1J6 154 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 TXNRD3NBQ6F5E7 133 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 POLNQ7Z5Q5 900 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 ATPAF2Q8N5M1 289 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 LZTR1Q8N653 840 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 EIF3CQ99613 913 aaKnown RBP11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 DPYSL5Q9BPU6 564 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 MGME1Q9BQP7 344 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 TBC1D10AQ9BXI6 508 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 NAT10Q9H0A0 1025 aaKnown RBP11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 HAUS4Q9H6D7 363 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 ARFGAP3Q9NP61 516 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 CHKBQ9Y259 395 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 PLAAQ9Y263 795 aa11.87□□□□□ -0.51
TRAFD1-205ENST00000548277 TLN1Q9Y490 2541 aaKnown RBP11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 LRRC53A6NM62 1247 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 STK17BO94768 372 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 CLDN7O95471 211 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 SKILP12757 684 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 ACP5P13686 325 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 TCN2P20062 427 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 MAP4P27816 1152 aaKnown RBP11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 HSPA9P38646 679 aaKnown RBP11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 CASRP41180 1078 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 RAB15P59190 212 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 DSC2Q02487 901 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 FOXM1Q08050 763 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 CDC20Q12834 499 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 SQSTM1Q13501 440 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 ASIC2Q16515 512 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 ZNF648Q5T619 568 aaPredicted RBP11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 CEACAM20Q6UY09 585 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 ADAMTSL4Q6UY14 1074 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 ZNF571Q7Z3V5 609 aaPredicted RBP11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 ARHGAP22Q7Z5H3 698 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 NDUFAF2Q8N183 169 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 SFRP1Q8N474 314 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 BMPERQ8N8U9 685 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 SCARF2Q96GP6 870 aaPredicted RBP11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 ELMO2Q96JJ3 720 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 SLC45A3Q96JT2 553 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 BTBD6Q96KE9 485 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 CATSPER2Q96P56 530 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 CSPG4P5Q96PW8 444 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 RTN4Q9NQC3 1192 aaKnown RBP11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 TBC1D29Q9UFV1 150 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 ANAPC2Q9UJX6 822 aa11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 OAS3Q9Y6K5 1087 aaKnown RBP11.86□□□□□ -0.51
TRAFD1-205ENST00000548277 COL12A1Q99715 3063 aa11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 SMTNL1A8MU46 457 aa11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 K7EM74 188 aa11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 POLR1CO15160 346 aaPredicted RBP11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 MTSS1O43312 755 aa11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 RARAP10276 462 aa11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 TEAD1P28347 426 aa11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 SSR1P43307 286 aaKnown RBP11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 SEPHS1P49903 392 aa11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 FOXK1P85037 733 aa11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 DPTQ07507 201 aa11.85□□□□□ -0.51
TRAFD1-205ENST00000548277 MMRN1Q13201 1228 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms