RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 PPM1NQ8N819 430 aa15.77■□□□□ 0.12
TRAFD1-203ENST00000547063 ZNF398Q8TD17 642 aa15.77■□□□□ 0.12
TRAFD1-203ENST00000547063 ZIM3Q96PE6 472 aa15.77■□□□□ 0.12
TRAFD1-203ENST00000547063 SPATA16Q9BXB7 569 aa15.77■□□□□ 0.12
TRAFD1-203ENST00000547063 C1QTNF2Q9BXJ5 285 aa15.77■□□□□ 0.12
TRAFD1-203ENST00000547063 SUDS3Q9H7L9 328 aaPredicted RBP15.77■□□□□ 0.12
TRAFD1-203ENST00000547063 C2orf42Q9NWW7 574 aa15.77■□□□□ 0.12
TRAFD1-203ENST00000547063 FNDC3AQ9Y2H6 1198 aaKnown RBP15.77■□□□□ 0.12
TRAFD1-203ENST00000547063 TECTAO75443 2155 aa15.77■□□□□ 0.11
TRAFD1-203ENST00000547063 IGLON5A6NGN9 336 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 POC1B-GALNT4F8VUJ3 575 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 CCL22O00626 93 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 PI15O43692 258 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 RNGTTO60942 597 aaKnown RBP15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 CDH16O75309 829 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 SEMA4FO95754 770 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 CNTFP26441 200 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 CD6P30203 668 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 FOXN2P32314 431 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 NUDT1P36639 197 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 SERPINB9P50453 376 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 CSE1LP55060 971 aaKnown RBP15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 NFATC2Q13469 925 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 PEX6Q13608 980 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 TMEM259Q4ZIN3 620 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 SETMARQ53H47 684 aaPredicted RBP15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 UBAP2Q5T6F2 1119 aaKnown RBP15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 HENMT1Q5T8I9 393 aaKnown RBP15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 BMP8AQ7Z5Y6 402 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 TDRPQ86YL5 185 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 CILP2Q8IUL8 1156 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 UNC5BQ8IZJ1 945 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 SLC44A1Q8WWI5 657 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 AP2M1Q96CW1 435 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 SPACA7Q96KW9 195 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 PAFAH2Q99487 392 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 PCED1AQ9H1Q7 454 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 ASB8Q9H765 288 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 INTS10Q9NVR2 710 aaKnown RBP15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 PSMC3IPQ9P2W1 217 aaPredicted RBP15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 CRLS1Q9UJA2 301 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 ZNF180Q9UJW8 692 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 FBXO5Q9UKT4 447 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 CYP8B1Q9UNU6 501 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 NFS1Q9Y697 457 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 TRPM6Q9BX84 2022 aa15.76■□□□□ 0.11
TRAFD1-203ENST00000547063 A0A1W2PQU0 124 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 GOLGA8KD6RF30 607 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 GOLGA8TH3BQL2 631 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 AXIN1O15169 862 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 LAMTOR5O43504 91 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 OPA1O60313 960 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 KRT38O76015 456 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 C1QAP02745 245 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 SHBGP04278 402 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 ACSL1P33121 698 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 GP5P40197 560 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 CCR5P51681 352 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 CHRNA6Q15825 494 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 KRT71Q3SY84 523 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 USP39Q53GS9 565 aaKnown RBP15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 CEP85LQ5SZL2 805 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 GRTP1Q5TC63 336 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 TAS2R42Q7RTR8 314 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 GOLGA6L1Q8N7Z2 621 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 C2CD4AQ8NCU7 369 aaPredicted RBP15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 HEXDCQ8WVB3 486 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 RIOK2Q9BVS4 552 aaKnown RBP15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 SLC17A9Q9BYT1 436 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 ABCG8Q9H221 673 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 SMOXQ9NWM0 555 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 WSB2Q9NYS7 404 aaPredicted RBP15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 IL1RAPL1Q9NZN1 696 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 CD84Q9UIB8 345 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 CORO1CQ9ULV4 474 aaPredicted RBP15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 PLXNA2O75051 1894 aa15.75■□□□□ 0.11
TRAFD1-203ENST00000547063 LRRK1Q38SD2 2015 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 TRBV5-4A0A0C4DH59 114 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 IQANK1A0A1B0GTG1 560 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 PRR23AA6NEV1 266 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 OR51F1A6NGY5 319 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 FAM47DPA6NHR8 397 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 AGAP14A8MT82 685 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 CXorf49A8MYA2 514 aaPredicted RBP15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 K7ESF4 209 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 GAPDHSO14556 408 aaPredicted RBP15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 NDUFS2O75306 463 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 NDUFS3O75489 264 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 KRT37O76014 449 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 GM2AP17900 193 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 TEAD1P28347 426 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 SPRP35270 261 aaPredicted RBP15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 SLC1A2P43004 574 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 LEPRP48357 1165 aaKnown RBP15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 ZNF844Q08AG5 666 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 GPS2Q13227 327 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 LRRC14Q15048 493 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 TYSND1Q2T9J0 566 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 ADGRD1Q6QNK2 874 aa15.74■□□□□ 0.11
TRAFD1-203ENST00000547063 SLC36A4Q6YBV0 504 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms