RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 EGFL8Q99944 293 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 TMEM175Q9BSA9 504 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 ZDHHC6Q9H6R6 413 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 ASB8Q9H765 288 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 CXXC1Q9P0U4 656 aaPredicted RBP12.68□□□□□ -0.38
SCAF11-209ENST00000547018 POMPQ9Y244 141 aa12.68□□□□□ -0.38
SCAF11-209ENST00000547018 TMEM114B3SHH9 223 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 SDHDO14521 159 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 GIPC1O14908 333 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 MAP3K7O43318 606 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 SNX2O60749 519 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 DNAJA2O60884 412 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 SH3BGRLO75368 114 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 CLTBP09497 229 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 ANPEPP15144 967 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 XRCC1P18887 633 aaPredicted RBP12.67□□□□□ -0.38
SCAF11-209ENST00000547018 GGT5P36269 586 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 STC1P52823 247 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 THOP1P52888 689 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 SH3BP2P78314 561 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 FASTKQ14296 549 aaKnown RBP12.67□□□□□ -0.38
SCAF11-209ENST00000547018 FUT11Q495W5 492 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 TEX26Q8N6G2 289 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 PTCD2Q8WV60 388 aaKnown RBP12.67□□□□□ -0.38
SCAF11-209ENST00000547018 TDRD1Q9BXT4 1180 aaKnown RBP12.67□□□□□ -0.38
SCAF11-209ENST00000547018 ADGRE3Q9BY15 652 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 ARNT2Q9HBZ2 717 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 USP34Q70CQ2 3546 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 PIKFYVEQ9Y2I7 2098 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 FFAR3O14843 346 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 GPR42O15529 346 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 CLASP2O75122 1294 aaKnown RBP12.67□□□□□ -0.38
SCAF11-209ENST00000547018 FRA10AC1Q70Z53 315 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 TMEM150AQ86TG1 271 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 CNTN4Q8IWV2 1026 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 PDZD8Q8NEN9 1154 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 CEP70Q8NHQ1 597 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 MTFMTQ96DP5 389 aaKnown RBP12.67□□□□□ -0.38
SCAF11-209ENST00000547018 LINC00597Q9H2U6 94 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 WDR41Q9HAD4 459 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 EBF2Q9HAK2 575 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 PDFQ9HBH1 243 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 MCM8Q9UJA3 840 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 LSM7Q9UK45 103 aaKnown RBP12.67□□□□□ -0.38
SCAF11-209ENST00000547018 VCANP13611 3396 aa12.67□□□□□ -0.38
SCAF11-209ENST00000547018 ILVBLA1L0T0 632 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 TARM1B6A8C7 271 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 UGT2B4P06133 528 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 ZNF37AP17032 561 aaPredicted RBP12.66□□□□□ -0.38
SCAF11-209ENST00000547018 PPARGP37231 505 aaPredicted RBP12.66□□□□□ -0.38
SCAF11-209ENST00000547018 AP2B1P63010 937 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 MSLNQ13421 630 aaPredicted RBP12.66□□□□□ -0.38
SCAF11-209ENST00000547018 FLOT2Q14254 428 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 FAM45BPQ6NSW5 357 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 UGT3A1Q6NUS8 523 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 HERC6Q8IVU3 1022 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 SLC39A11Q8N1S5 342 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 FIBCD1Q8N539 461 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 FAM45AQ8TCE6 357 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 TCF25Q9BQ70 676 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 C17orf80Q9BSJ5 609 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 KLF16Q9BXK1 252 aaPredicted RBP12.66□□□□□ -0.38
SCAF11-209ENST00000547018 SEMA6AQ9H2E6 1030 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 PAK6Q9NQU5 681 aaPredicted RBP12.66□□□□□ -0.38
SCAF11-209ENST00000547018 EIF2B4Q9UI10 523 aaKnown RBP12.66□□□□□ -0.38
SCAF11-209ENST00000547018 ASB1Q9Y576 335 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 HCFC2Q9Y5Z7 792 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 WDR87Q6ZQQ6 2873 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 TRIM43BA6NCK2 446 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 PIP5K1BO14986 540 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 THRAP10827 490 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 CA5AP35218 305 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 VHLP40337 213 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 WDR5P61964 334 aaKnown RBP12.66□□□□□ -0.38
SCAF11-209ENST00000547018 NRG1Q02297 640 aaPredicted RBP12.66□□□□□ -0.38
SCAF11-209ENST00000547018 RAD51Q06609 339 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 CAPRIN1Q14444 709 aaKnown RBP12.66□□□□□ -0.38
SCAF11-209ENST00000547018 GRB7Q14451 532 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 WLSQ5T9L3 541 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 CNKSR3Q6P9H4 555 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 KIAA0408Q6ZU52 694 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 KBTBD2Q8IY47 623 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 ISL2Q96A47 359 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 TRIM43Q96BQ3 446 aaPredicted RBP12.66□□□□□ -0.38
SCAF11-209ENST00000547018 PPP1R2P1Q96PQ5 205 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 MCMBPQ9BTE3 642 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 CIPCQ9C0C6 399 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 LCHNA4D1U4 455 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 RGSL1A5PLK6 1076 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 BAIAP3O94812 1187 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 LUC7L3O95232 432 aaKnown RBP12.66□□□□□ -0.38
SCAF11-209ENST00000547018 PRAMEF1O95521 474 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 CD1DP15813 335 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 BCL2L1Q07817 233 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 ACAP2Q15057 778 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 MBOAT1Q6ZNC8 495 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 TMEM25Q86YD3 366 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 EGFL6Q8IUX8 553 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 CYB5D2Q8WUJ1 264 aa12.66□□□□□ -0.38
SCAF11-209ENST00000547018 MGME1Q9BQP7 344 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms